DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTSSS
Uniprot ID:
Q14161
Source protein:
ARF GTPase-activating protein GIT2
Source gene:
GIT2
Class:
DEG_SPOP_SBC_1
Location:
554:558
E3 ligase:
SPOP
DEGRON score:
0.9992
ASA_SCORE:
71.92
COIL:
0.763
CONS_SCORE:
0.3961
DSS_SCORE:
0.4452
HELIX:
0.0762
FCONS_SCORE:
1.0346
RIG_SCORE:
0.646
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P545S
TCGA-D3-A8GI
SKCM
TCGA
VTSSS
DEG_SPOP_SBC_1
0.0833
p.P545S
DO50284
SKCM
ICGC
VTSSS
DEG_SPOP_SBC_1
0.0833
p.S568Y
TCGA-EJ-7317
PRAD
TCGA
VTSSS
DEG_SPOP_SBC_1
0.5
p.S568Y
TCGA-ZF-AA4W
BLCA
TCGA
VTSSS
DEG_SPOP_SBC_1
0.5
p.A552V
DO229005
COCA
ICGC
VTSSS
DEG_SPOP_SBC_1
0.2778
p.A552V
DO229353
LAML
ICGC
VTSSS
DEG_SPOP_SBC_1
0.2778
p.A552V
DO52365
LUSC
ICGC
VTSSS
DEG_SPOP_SBC_1
0.2778
p.Q562K
DO229018
LICA
ICGC
VTSSS
DEG_SPOP_SBC_1
0.6667
p.P564T
DO229038
LICA
ICGC
VTSSS
DEG_SPOP_SBC_1
0.1667
p.N547I
DO231155
LUSC
ICGC
VTSSS
DEG_SPOP_SBC_1
0.1389
p.F544L
SIDM00881
Breast Carcinoma
GDSC
VTSSS
DEG_SPOP_SBC_1
0.0556
p.F544L
ACH-000352
Breast Cancer
CCLE
VTSSS
DEG_SPOP_SBC_1
0.0556
p.F544L
HCC1428
breast
COSMIC
VTSSS
DEG_SPOP_SBC_1
0.0556
p.V554A
SIDM01128
Small Cell Lung Carcinoma
GDSC
VTSSS
DEG_SPOP_SBC_1
0.5825
p.V554A
ACH-000767
Lung Cancer
CCLE
VTSSS
DEG_SPOP_SBC_1
0.5825
p.V554A
NCI-H526
lung
COSMIC
VTSSS
DEG_SPOP_SBC_1
0.5825
p.G549R
SIDM01700
Hodgkin's Lymphoma
GDSC
VTSSS
DEG_SPOP_SBC_1
0.1944
p.G549R
ACH-000165
Non-Cancerous
CCLE
VTSSS
DEG_SPOP_SBC_1
0.1944
p.S561N
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
VTSSS
DEG_SPOP_SBC_1
0.25
p.D551E
HuH-7
liver
COSMIC
VTSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with GIT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60318
Germinal-center associated nuclear protein
DEG_SPOP_SBC_1
197:201
VTSSS
SPOP
0.938
More...
P02533
Keratin, type I cytoskeletal 14
DEG_SPOP_SBC_1
441:445
VTSSS
SPOP
0.9845
More...
P15056
Serine/threonine-protein kinase B-raf
DEG_SPOP_SBC_1
120:124
VTSSS
SPOP
0.9734
More...
P19484
Transcription factor EB
DEG_SPOP_SBC_1
207:211
VTSSS
SPOP
0.9601
More...
Q14008
Cytoskeleton-associated protein 5
DEG_SPOP_SBC_1
2008:2012
VTSSS
SPOP
0.9659
More...
Q14161
ARF GTPase-activating protein GIT2
DEG_SPOP_SBC_1
554:558
VTSSS
SPOP
0.9992
More...
Q15911
Zinc finger homeobox protein 3
DEG_SPOP_SBC_1
3641:3645
VTSSS
SPOP
0.8527
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3548:3552
VTSSS
SPOP
0.9001
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
442:446
VTSSS
SPOP
0.9354
More...
Q8IY22
C-Maf-inducing protein
DEG_SPOP_SBC_1
3:7
VTSSS
SPOP
0.9749
More...
Q8TBK6
Zinc finger CCHC domain-containing protein 10
DEG_SPOP_SBC_1
108:112
VTSSS
SPOP
0.9792
More...
Q8TF40
Folliculin-interacting protein 1
DEG_SPOP_SBC_1
104:108
VTSSS
SPOP
0.9551
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3897:3901
VTSSS
SPOP
0.9951
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4932:4936
VTSSS
SPOP
0.8363
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7283:7287
VTSSS
SPOP
0.9977
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8158:8162
VTSSS
SPOP
0.9995
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11046:11050
VTSSS
SPOP
0.9225
More...
Q92622
Run domain Beclin-1-interacting and cysteine-rich domain-containing protein
DEG_SPOP_SBC_1
565:569
VTSSS
SPOP
0.9982
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1615:1619
VTSSS
SPOP
0.8983
More...
Q9UPP1
Histone lysine demethylase PHF8
DEG_SPOP_SBC_1
965:969
VTSSS
SPOP
0.9734
More...
A6NNH2
Protein FAM90A27P
DEG_SPOP_SBC_1
449:453
VTSSS
SPOP
0.9881
More...