DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VTTST
Uniprot ID:
Q9HAR2
Source protein:
Adhesion G protein-coupled receptor L3
Source gene:
ADGRL3
Class:
DEG_SPOP_SBC_1
Location:
1372:1376
E3 ligase:
SPOP
DEGRON score:
0.9817
ASA_SCORE:
83.2
COIL:
0.919
CONS_SCORE:
0.26
DSS_SCORE:
0.6288
HELIX:
0.0692
FCONS_SCORE:
0.9078
RIG_SCORE:
0.685
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1373H
SIDM01951
Colorectal Carcinoma
GDSC
VTTST
DEG_SPOP_SBC_1
0.7694
p.A1386V
SIDM00499
Prostate Carcinoma
GDSC
VTTST
DEG_SPOP_SBC_1
0.0556
p.A1386V
22RV1
prostate
COSMIC
VTTST
DEG_SPOP_SBC_1
0.0556
p.L1366V
NCI-H2081
lung
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1667
p.R1382S
NCI-H835
lung
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1667
p.P1371H
ASH-3
thyroid
COSMIC
VTTST
DEG_SPOP_SBC_1
0.3056
p.P1362H
ASH-3
thyroid
COSMIC
VTTST
DEG_SPOP_SBC_1
0.0556
p.H1378D
CAL-12T
lung
COSMIC
VTTST
DEG_SPOP_SBC_1
0.2778
p.E1372V
SW1271
lung
COSMIC
VTTST
DEG_SPOP_SBC_1
0.7693
p.E1381V
SW1271
lung
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1944
p.E1373V
SW684
soft_tissue
COSMIC
VTTST
DEG_SPOP_SBC_1
0.7693
p.R1382M
NCI-H835
lung
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1667
p.E1372G
SK-MEL-31
skin
COSMIC
VTTST
DEG_SPOP_SBC_1
0.7199
p.R1383Q
Saos-2
bone
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1389
p.T1364I
TE-4
oesophagus
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1111
p.E1364V
SW684
soft_tissue
COSMIC
VTTST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with ADGRL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A5YKK6
CCR4-NOT transcription complex subunit 1
DEG_SPOP_SBC_1
1040:1044
VTTST
SPOP
0.9972
More...
O95274
Ly6/PLAUR domain-containing protein 3
DEG_SPOP_SBC_1
255:259
VTTST
SPOP
0.8718
More...
P08670
Vimentin
DEG_SPOP_SBC_1
31:35
VTTST
SPOP
0.9992
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
2244:2248
VTTST
SPOP
0.5533
More...
P15822
Zinc finger protein 40
DEG_SPOP_SBC_1
714:718
VTTST
SPOP
0.6604
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2256:2260
VTTST
SPOP
0.9908
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3362:3366
VTTST
SPOP
0.9176
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4093:4097
VTTST
SPOP
0.9149
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
365:369
VTTST
SPOP
0.9781
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3430:3434
VTTST
SPOP
0.9177
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4862:4866
VTTST
SPOP
0.9247
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
266:270
VTTST
SPOP
0.9076
More...
Q9H2Y7
Zinc finger protein 106
DEG_SPOP_SBC_1
1396:1400
VTTST
SPOP
0.9451
More...
Q9HAR2
Adhesion G protein-coupled receptor L3
DEG_SPOP_SBC_1
1372:1376
VTTST
SPOP
0.9817
More...
Q9ULV0
Unconventional myosin-Vb
DEG_SPOP_SBC_1
950:954
VTTST
SPOP
0.7192
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
1991:1995
VTTST
SPOP
0.8266
More...