DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AGTSS
Uniprot ID:
Q6ZP82
Source protein:
Coiled-coil domain-containing protein 141
Source gene:
CCDC141
Class:
DEG_SPOP_SBC_1
Location:
1253:1257
E3 ligase:
SPOP
DEGRON score:
0.9861
ASA_SCORE:
67.56
COIL:
0.8706
CONS_SCORE:
0
DSS_SCORE:
0.5563
HELIX:
0.0232
FCONS_SCORE:
0
RIG_SCORE:
0.5762
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1259V
TCGA-61-1899
OV
TCGA
AGTSS
DEG_SPOP_SBC_1
0.2778
p.G1259V
DO28346
OV
ICGC
AGTSS
DEG_SPOP_SBC_1
0.2778
p.G1254W
TCGA-63-A5MW
LUSC
TCGA
AGTSS
DEG_SPOP_SBC_1
0.6714
p.G1254W
DO219169
LUSC
ICGC
AGTSS
DEG_SPOP_SBC_1
0.6714
p.V1265L
TCGA-A2-A0YJ
BRCA
TCGA
AGTSS
DEG_SPOP_SBC_1
0.1111
p.V1265L
DO3013
BRCA
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1111
p.E1263K
TCGA-AA-3977
COAD
TCGA
AGTSS
DEG_SPOP_SBC_1
0.1667
p.E1263K
TCGA-EE-A181
SKCM
TCGA
AGTSS
DEG_SPOP_SBC_1
0.1667
p.E1263K
TCGA-EE-A2MS
SKCM
TCGA
AGTSS
DEG_SPOP_SBC_1
0.1667
p.E1263K
DO8730
COAD
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1667
p.E1263K
DO37567
SKCM
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1667
p.E1263K
DO37444
SKCM
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1667
p.L1266I
TCGA-AA-A00N
COAD
TCGA
AGTSS
DEG_SPOP_SBC_1
0.0833
p.L1266I
TCGA-AA-A010
COAD
TCGA
AGTSS
DEG_SPOP_SBC_1
0.0833
p.L1266I
DO9876
COAD
ICGC
AGTSS
DEG_SPOP_SBC_1
0.0833
p.S1243G
TCGA-AG-3891
READ
TCGA
AGTSS
DEG_SPOP_SBC_1
0.0556
p.S1243G
DO36388
READ
ICGC
AGTSS
DEG_SPOP_SBC_1
0.0556
p.A1253D
TCGA-AX-A06F
UCEC
TCGA
AGTSS
DEG_SPOP_SBC_1
0.7793
p.A1253D
DO41752
UCEC
ICGC
AGTSS
DEG_SPOP_SBC_1
0.7793
p.G1250W
TCGA-DA-A960
SKCM
TCGA
AGTSS
DEG_SPOP_SBC_1
0.25
p.G1250W
DO219482
SKCM
ICGC
AGTSS
DEG_SPOP_SBC_1
0.25
p.T1255S
DO50398
ESAD
ICGC
AGTSS
DEG_SPOP_SBC_1
0.6005
p.H1245Y
DO220862
MELA
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1111
p.D1260N
DO220912
MELA
ICGC
AGTSS
DEG_SPOP_SBC_1
0.25
p.D1260N
DO222868
MELA
ICGC
AGTSS
DEG_SPOP_SBC_1
0.25
p.A1261T
SIDM00852
Glioma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.2222
p.A1261T
ACH-000389
Brain Cancer
CCLE
AGTSS
DEG_SPOP_SBC_1
0.2222
p.A1261T
H4
central_nervous_system
COSMIC
AGTSS
DEG_SPOP_SBC_1
0.2222
p.S1256R
SIDM00836
Colorectal Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.7427
p.S1256R
ACH-000820
Colon/Colorectal Cancer
CCLE
AGTSS
DEG_SPOP_SBC_1
0.7427
p.S1256R
SW403
large_intestine
COSMIC
AGTSS
DEG_SPOP_SBC_1
0.7427
p.G1250V
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.25
p.G1250V
ACH-000888
Lung Cancer
CCLE
AGTSS
DEG_SPOP_SBC_1
0.25
p.G1250V
NCI-H1793
lung
COSMIC
AGTSS
DEG_SPOP_SBC_1
0.25
p.D1260Y
SIDM01611
Endometrial Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.25
p.V1251L
SIDM01590
Breast Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with CCDC141 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60244
Mediator of RNA polymerase II transcription subunit 14
DEG_SPOP_SBC_1
1147:1151
AGTSS
SPOP
0.9972
More...
O95073
Fibrinogen silencer-binding protein
DEG_SPOP_SBC_1
134:138
AGTSS
SPOP
0.9917
More...
O95249
Golgi SNAP receptor complex member 1
DEG_SPOP_SBC_1
3:7
AGTSS
SPOP
0.9984
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
265:269
AGTSS
SPOP
0.9527
More...
P82094
TATA element modulatory factor
DEG_SPOP_SBC_1
166:170
AGTSS
SPOP
0.9993
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
724:728
AGTSS
SPOP
0.999
More...
Q5VT06
Centrosome-associated protein 350
DEG_SPOP_SBC_1
1271:1275
AGTSS
SPOP
0.9877
More...
Q6ZP82
Coiled-coil domain-containing protein 141
DEG_SPOP_SBC_1
1253:1257
AGTSS
SPOP
0.9861
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
3117:3121
AGTSS
SPOP
0.9982
More...
Q8TEH3
DENN domain-containing protein 1A
DEG_SPOP_SBC_1
775:779
AGTSS
SPOP
0.8732
More...
Q8WV16
DDB1- and CUL4-associated factor 4
DEG_SPOP_SBC_1
58:62
AGTSS
SPOP
0.9954
More...
Q99990
Transcription cofactor vestigial-like protein 1
DEG_SPOP_SBC_1
137:141
AGTSS
SPOP
0.8905
More...
Q9HCC9
Lateral signaling target protein 2 homolog
DEG_SPOP_SBC_1
474:478
AGTSS
SPOP
0.7998
More...
Q9HCR9
Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A
DEG_SPOP_SBC_1
56:60
AGTSS
SPOP
0.8678
More...
Q9P0V3
SH3 domain-binding protein 4
DEG_SPOP_SBC_1
197:201
AGTSS
SPOP
0.9517
More...
Q9P212
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1
DEG_SPOP_SBC_1
1162:1166
AGTSS
SPOP
0.9841
More...
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
385:389
AGTSS
SPOP
0.9713
More...
Q9Y5A7
NEDD8 ultimate buster 1
DEG_SPOP_SBC_1
556:560
AGTSS
SPOP
0.9912
More...
Q5VWJ9
Sorting nexin-30
DEG_SPOP_SBC_1
63:67
AGTSS
SPOP
0.9979
More...
Q5JYT7
Uncharacterized protein KIAA1755
DEG_SPOP_SBC_1
294:298
AGTSS
SPOP
0.9974
More...
Q8N4B5
Proline-rich protein 18
DEG_SPOP_SBC_1
119:123
AGTSS
SPOP
0.9888
More...
Q9H6K5
Proline-rich protein 36
DEG_SPOP_SBC_1
83:87
AGTSS
SPOP
0.9884
More...