DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AGTSS
Uniprot ID:
Q8TEH3
Source protein:
DENN domain-containing protein 1A
Source gene:
DENND1A
Class:
DEG_SPOP_SBC_1
Location:
775:779
E3 ligase:
SPOP
DEGRON score:
0.8732
ASA_SCORE:
64.2
COIL:
0.8328
CONS_SCORE:
0.282
DSS_SCORE:
0.4938
HELIX:
0.1398
FCONS_SCORE:
1.0068
RIG_SCORE:
0.6631
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D780N
TCGA-44-2665
LUAD
TCGA
AGTSS
DEG_SPOP_SBC_1
0.3056
p.D780N
DO23582
LUAD
ICGC
AGTSS
DEG_SPOP_SBC_1
0.3056
p.D780N
ACH-001802
Liposarcoma
CCLE
AGTSS
DEG_SPOP_SBC_1
0.3056
p.L785F
TCGA-CW-6093
KIRC
TCGA
AGTSS
DEG_SPOP_SBC_1
0.1667
p.L785F
DO16248
KIRC
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1667
p.T777M
TCGA-DF-A2KU
UCEC
TCGA
AGTSS
DEG_SPOP_SBC_1
0.7423
p.T777M
DO228338
MALY
ICGC
AGTSS
DEG_SPOP_SBC_1
0.7423
p.T777M
DO223286
UCEC
ICGC
AGTSS
DEG_SPOP_SBC_1
0.7423
p.A784T
DO233889
GACA
ICGC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.P772L
DO220886
MELA
ICGC
AGTSS
DEG_SPOP_SBC_1
0.25
p.A784D
SIDM01096
Colorectal Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM00715
Non-Small Cell Lung Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM00627
Cervical Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM01168
Colorectal Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM00265
Ewing's Sarcoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM00900
Non-Cancerous
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM00864
Cervical Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM01013
B-Cell Non-Hodgkin's Lymphoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM00701
Non-Cancerous
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM01502
Endometrial Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784D
SIDM01323
Oral Cavity Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784S
SIDM01156
Small Cell Lung Carcinoma
GDSC
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784S
ACH-000890
Lung Cancer
CCLE
AGTSS
DEG_SPOP_SBC_1
0.1944
p.A784S
SW1271
lung
COSMIC
AGTSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with DENND1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60244
Mediator of RNA polymerase II transcription subunit 14
DEG_SPOP_SBC_1
1147:1151
AGTSS
SPOP
0.9972
More...
O95073
Fibrinogen silencer-binding protein
DEG_SPOP_SBC_1
134:138
AGTSS
SPOP
0.9917
More...
O95249
Golgi SNAP receptor complex member 1
DEG_SPOP_SBC_1
3:7
AGTSS
SPOP
0.9984
More...
P16070
CD44 antigen
DEG_SPOP_SBC_1
265:269
AGTSS
SPOP
0.9527
More...
P82094
TATA element modulatory factor
DEG_SPOP_SBC_1
166:170
AGTSS
SPOP
0.9993
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
724:728
AGTSS
SPOP
0.999
More...
Q5VT06
Centrosome-associated protein 350
DEG_SPOP_SBC_1
1271:1275
AGTSS
SPOP
0.9877
More...
Q6ZP82
Coiled-coil domain-containing protein 141
DEG_SPOP_SBC_1
1253:1257
AGTSS
SPOP
0.9861
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
3117:3121
AGTSS
SPOP
0.9982
More...
Q8TEH3
DENN domain-containing protein 1A
DEG_SPOP_SBC_1
775:779
AGTSS
SPOP
0.8732
More...
Q8WV16
DDB1- and CUL4-associated factor 4
DEG_SPOP_SBC_1
58:62
AGTSS
SPOP
0.9954
More...
Q99990
Transcription cofactor vestigial-like protein 1
DEG_SPOP_SBC_1
137:141
AGTSS
SPOP
0.8905
More...
Q9HCC9
Lateral signaling target protein 2 homolog
DEG_SPOP_SBC_1
474:478
AGTSS
SPOP
0.7998
More...
Q9HCR9
Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A
DEG_SPOP_SBC_1
56:60
AGTSS
SPOP
0.8678
More...
Q9P0V3
SH3 domain-binding protein 4
DEG_SPOP_SBC_1
197:201
AGTSS
SPOP
0.9517
More...
Q9P212
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1
DEG_SPOP_SBC_1
1162:1166
AGTSS
SPOP
0.9841
More...
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_SPOP_SBC_1
385:389
AGTSS
SPOP
0.9713
More...
Q9Y5A7
NEDD8 ultimate buster 1
DEG_SPOP_SBC_1
556:560
AGTSS
SPOP
0.9912
More...
Q5VWJ9
Sorting nexin-30
DEG_SPOP_SBC_1
63:67
AGTSS
SPOP
0.9979
More...
Q5JYT7
Uncharacterized protein KIAA1755
DEG_SPOP_SBC_1
294:298
AGTSS
SPOP
0.9974
More...
Q8N4B5
Proline-rich protein 18
DEG_SPOP_SBC_1
119:123
AGTSS
SPOP
0.9888
More...
Q9H6K5
Proline-rich protein 36
DEG_SPOP_SBC_1
83:87
AGTSS
SPOP
0.9884
More...