DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
ATTSS
Uniprot ID:
Q96HC4
Source protein:
PDZ and LIM domain protein 5
Source gene:
PDLIM5
Class:
DEG_SPOP_SBC_1
Location:
155:159
E3 ligase:
SPOP
DEGRON score:
0.9493
ASA_SCORE:
75.88
COIL:
0.8776
CONS_SCORE:
0.4368
DSS_SCORE:
0.5119
HELIX:
0.0978
FCONS_SCORE:
1.0317
RIG_SCORE:
0.6048
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S154G
TCGA-85-7697
LUSC
TCGA
ATTSS
DEG_SPOP_SBC_1
0.3056
p.S151R
DO225081
BRCA
ICGC
ATTSS
DEG_SPOP_SBC_1
0.2222
p.S151R
DO52559
BRCA
ICGC
ATTSS
DEG_SPOP_SBC_1
0.2222
p.P165L
DO8103
COAD
ICGC
ATTSS
DEG_SPOP_SBC_1
0.1667
p.S148G
DO27053
LUSC
ICGC
ATTSS
DEG_SPOP_SBC_1
0.1389
p.P164S
DO228138
PBCA
ICGC
ATTSS
DEG_SPOP_SBC_1
0.1944
p.A155V
SIDM00450
Acute Myeloid Leukemia
GDSC
ATTSS
DEG_SPOP_SBC_1
0.5825
p.A155V
SIDM01570
Ovarian Carcinoma
GDSC
ATTSS
DEG_SPOP_SBC_1
0.5825
p.A155V
ACH-000218
Leukemia
CCLE
ATTSS
DEG_SPOP_SBC_1
0.5825
p.A155V
ACH-000324
Ovarian Cancer
CCLE
ATTSS
DEG_SPOP_SBC_1
0.5825
p.A155V
PL-21
haematopoietic_and_lymphoid_tissue
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.5825
p.T151I
SIDM00129
Melanoma
GDSC
ATTSS
DEG_SPOP_SBC_1
0.2222
p.W168C
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
ATTSS
DEG_SPOP_SBC_1
0.0833
p.W168C
ACH-000852
Lung Cancer
CCLE
ATTSS
DEG_SPOP_SBC_1
0.0833
p.W168C
NCI-H1435
lung
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.0833
p.H160Y
SIDM01445
Gastric Carcinoma
GDSC
ATTSS
DEG_SPOP_SBC_1
0.3056
p.H160Y
ACH-000736
Gastric Cancer
CCLE
ATTSS
DEG_SPOP_SBC_1
0.3056
p.R169C
ACH-000172
Rhabdoid
CCLE
ATTSS
DEG_SPOP_SBC_1
0.0556
p.W162C
NCI-H1435
lung
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.25
p.C154F
SCH
stomach
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.3056
p.L163P
NCI-H810
lung
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.2222
p.W148C
NCI-H1435
lung
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.1389
p.Q156E
MDA-MB-453
breast
COSMIC
ATTSS
DEG_SPOP_SBC_1
0.6744
Drug responses associated with PDLIM5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28715
DNA excision repair protein ERCC-5
DEG_SPOP_SBC_1
1143:1147
ATTSS
SPOP
0.9952
More...
P43694
Transcription factor GATA-4
DEG_SPOP_SBC_1
353:357
ATTSS
SPOP
0.857
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1261:1265
ATTSS
SPOP
0.9691
More...
P78364
Polyhomeotic-like protein 1
DEG_SPOP_SBC_1
609:613
ATTSS
SPOP
0.9204
More...
Q2M3C7
A-kinase anchor protein SPHKAP
DEG_SPOP_SBC_1
826:830
ATTSS
SPOP
0.9894
More...
Q58EX2
Protein sidekick-2
DEG_SPOP_SBC_1
1210:1214
ATTSS
SPOP
0.6255
More...
Q6PIW4
Fidgetin-like protein 1
DEG_SPOP_SBC_1
531:535
ATTSS
SPOP
0.5474
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
123:127
ATTSS
SPOP
0.9883
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7254:7258
ATTSS
SPOP
0.9689
More...
Q8NBF1
Zinc finger protein GLIS1
DEG_SPOP_SBC_1
433:437
ATTSS
SPOP
0.9971
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
508:512
ATTSS
SPOP
0.9959
More...
Q92537
Sushi domain-containing protein 6
DEG_SPOP_SBC_1
255:259
ATTSS
SPOP
0.9991
More...
Q96HC4
PDZ and LIM domain protein 5
DEG_SPOP_SBC_1
155:159
ATTSS
SPOP
0.9493
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
366:370
ATTSS
SPOP
0.9751
More...
Q9UPP5
AP2-interacting clathrin-endocytosis protein
DEG_SPOP_SBC_1
742:746
ATTSS
SPOP
0.8709
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2121:2125
ATTSS
SPOP
0.9126
More...
Q8IX06
Putative exonuclease GOR
DEG_SPOP_SBC_1
261:265
ATTSS
SPOP
0.9965
More...
E2RYF6
Mucin-22
DEG_SPOP_SBC_1
1415:1419
ATTSS
SPOP
0.9991
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
1281:1285
ATTSS
SPOP
0.9971
More...
Q5BKX6
Solute carrier family 45 member 4
DEG_SPOP_SBC_1
476:480
ATTSS
SPOP
0.674
More...
A6NGY3
Uncharacterized protein C5orf52
DEG_SPOP_SBC_1
25:29
ATTSS
SPOP
0.8442
More...