DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PDTST
Uniprot ID:
P46821
Source protein:
Microtubule-associated protein 1B
Source gene:
MAP1B
Class:
DEG_SPOP_SBC_1
Location:
2035:2039
E3 ligase:
SPOP
DEGRON score:
0.9975
ASA_SCORE:
89.38
COIL:
0.866
CONS_SCORE:
0.4649
DSS_SCORE:
0.435
HELIX:
0.1098
FCONS_SCORE:
1.0081
RIG_SCORE:
0.7552
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2037A
TCGA-34-7107
LUSC
TCGA
PDTST
DEG_SPOP_SBC_1
0.825
p.T2037A
DO26449
LUSC
ICGC
PDTST
DEG_SPOP_SBC_1
0.825
p.E2046D
TCGA-AA-3984
COAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.1389
p.E2046D
TCGA-AG-A002
READ
TCGA
PDTST
DEG_SPOP_SBC_1
0.1389
p.E2046D
TCGA-E6-A1LX
UCEC
TCGA
PDTST
DEG_SPOP_SBC_1
0.1389
p.E2046D
DO9002
COAD
ICGC
PDTST
DEG_SPOP_SBC_1
0.1389
p.E2046D
DO41020
UCEC
ICGC
PDTST
DEG_SPOP_SBC_1
0.1389
p.R2033Q
TCGA-AA-A010
COAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.2778
p.R2033Q
TCGA-EO-A22U
UCEC
TCGA
PDTST
DEG_SPOP_SBC_1
0.2778
p.R2033Q
DO43755
UCEC
ICGC
PDTST
DEG_SPOP_SBC_1
0.2778
p.E2043K
TCGA-FW-A3R5
SKCM
TCGA
PDTST
DEG_SPOP_SBC_1
0.2222
p.E2043K
DO228114
EOPC
ICGC
PDTST
DEG_SPOP_SBC_1
0.2222
p.E2043K
DO37406
SKCM
ICGC
PDTST
DEG_SPOP_SBC_1
0.2222
p.C2041F
DO229045
LICA
ICGC
PDTST
DEG_SPOP_SBC_1
0.2778
p.Y2040C
SIDM01608
Endometrial Carcinoma
GDSC
PDTST
DEG_SPOP_SBC_1
0.75
p.Y2040C
ACH-000990
Endometrial/Uterine Cancer
CCLE
PDTST
DEG_SPOP_SBC_1
0.75
p.T2037I
SIDM01659
Kidney Carcinoma
GDSC
PDTST
DEG_SPOP_SBC_1
0.8189
p.T2037I
ACH-000313
Kidney Cancer
CCLE
PDTST
DEG_SPOP_SBC_1
0.8189
Drug responses associated with MAP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
2035:2039
PDTST
SPOP
0.9975
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
457:461
PDTST
SPOP
0.9481
More...
Q7Z7G8
Intermembrane lipid transfer protein VPS13B
DEG_SPOP_SBC_1
1274:1278
PDTST
SPOP
0.8975
More...
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
229:233
PDTST
SPOP
0.8141
More...
Q8WZ75
Roundabout homolog 4
DEG_SPOP_SBC_1
576:580
PDTST
SPOP
0.9187
More...
Q92794
Histone acetyltransferase KAT6A
DEG_SPOP_SBC_1
1140:1144
PDTST
SPOP
0.9558
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
236:240
PDTST
SPOP
0.9814
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
337:341
PDTST
SPOP
0.9895
More...
Q96LR2
Leucine rich adaptor protein 1
DEG_SPOP_SBC_1
131:135
PDTST
SPOP
0.9852
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
676:680
PDTST
SPOP
0.9536
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
801:805
PDTST
SPOP
0.9687
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.9775
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.5006
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.5384
More...
Q8N9M1
Uncharacterized protein C19orf47
DEG_SPOP_SBC_1
160:164
PDTST
SPOP
0.9381
More...