DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PDTST
Uniprot ID:
Q8NDL9
Source protein:
Cytosolic carboxypeptidase-like protein 5
Source gene:
AGBL5
Class:
DEG_SPOP_SBC_1
Location:
229:233
E3 ligase:
SPOP
DEGRON score:
0.8141
ASA_SCORE:
81.68
COIL:
0.9128
CONS_SCORE:
0.5221
DSS_SCORE:
0.4424
HELIX:
0.0594
FCONS_SCORE:
1.0435
RIG_SCORE:
0.7323
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P229S
DO229061
LICA
ICGC
PDTST
DEG_SPOP_SBC_1
0.6752
p.R238C
TCGA-D1-A17Q
UCEC
TCGA
PDTST
DEG_SPOP_SBC_1
0.1944
p.R238C
DO41903
UCEC
ICGC
PDTST
DEG_SPOP_SBC_1
0.1944
p.R238S
TCGA-EE-A20F
SKCM
TCGA
PDTST
DEG_SPOP_SBC_1
0.1944
p.R238S
DO37961
SKCM
ICGC
PDTST
DEG_SPOP_SBC_1
0.1944
p.R238H
SIDM00541
Colorectal Carcinoma
GDSC
PDTST
DEG_SPOP_SBC_1
0.1944
p.R223H
TCGA-A6-6648
COAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223H
TCGA-CM-4746
COAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223H
TCGA-DM-A1HB
COAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223H
TCGA-KK-A6E6
PRAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223H
DO10196
COAD
ICGC
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223H
DO7882
COAD
ICGC
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223H
DO51361
PRAD
ICGC
PDTST
DEG_SPOP_SBC_1
0.1667
p.R223L
DO229009
LICA
ICGC
PDTST
DEG_SPOP_SBC_1
0.1667
p.A240V
TCGA-DU-6392
LGG
TCGA
PDTST
DEG_SPOP_SBC_1
0.1389
p.A240V
DO22237
LGG
ICGC
PDTST
DEG_SPOP_SBC_1
0.1389
p.R220Q
SIDM01111
Ewing's Sarcoma
GDSC
PDTST
DEG_SPOP_SBC_1
0.0833
p.R220Q
ACH-000087
Bone Cancer
CCLE
PDTST
DEG_SPOP_SBC_1
0.0833
p.R220Q
SK-ES-1
bone
COSMIC
PDTST
DEG_SPOP_SBC_1
0.0833
Showing 1 to 19 of 19 entries
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Drug responses associated with AGBL5 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PDTST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
229:233
PDTST
SPOP
0.8141
More...
Q92794
Histone acetyltransferase KAT6A
DEG_SPOP_SBC_1
1140:1144
PDTST
SPOP
0.9558
More...
Q7Z7G8
Intermembrane lipid transfer protein VPS13B
DEG_SPOP_SBC_1
1274:1278
PDTST
SPOP
0.8975
More...
Q96LR2
Leucine rich adaptor protein 1
DEG_SPOP_SBC_1
131:135
PDTST
SPOP
0.9852
More...
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
2035:2039
PDTST
SPOP
0.9975
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
676:680
PDTST
SPOP
0.9536
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
801:805
PDTST
SPOP
0.9687
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
337:341
PDTST
SPOP
0.9895
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
236:240
PDTST
SPOP
0.9814
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.9775
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.5384
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.5006
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
457:461
PDTST
SPOP
0.9481
More...
Q8WZ75
Roundabout homolog 4
DEG_SPOP_SBC_1
576:580
PDTST
SPOP
0.9187
More...
Q8N9M1
Uncharacterized protein C19orf47
DEG_SPOP_SBC_1
160:164
PDTST
SPOP
0.9381
More...
Showing 1 to 15 of 15 entries
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