DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PDTST
Uniprot ID:
Q96LR2
Source protein:
Leucine rich adaptor protein 1
Source gene:
LURAP1
Class:
DEG_SPOP_SBC_1
Location:
131:135
E3 ligase:
SPOP
DEGRON score:
0.9852
ASA_SCORE:
81.76
COIL:
0.9226
CONS_SCORE:
0.625
DSS_SCORE:
0.5493
HELIX:
0.0538
FCONS_SCORE:
0.7417
RIG_SCORE:
0.6869
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G125C
TCGA-17-Z045
LUAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.1667
p.P131T
TCGA-28-1757
GBM
TCGA
PDTST
DEG_SPOP_SBC_1
0.7031
p.P131T
DO12166
GBM
ICGC
PDTST
DEG_SPOP_SBC_1
0.7031
p.D137N
TCGA-2W-A8YY
CESC
TCGA
PDTST
DEG_SPOP_SBC_1
0.2778
p.D137N
DO223732
CESC
ICGC
PDTST
DEG_SPOP_SBC_1
0.2778
p.R121C
TCGA-AZ-6601
COAD
TCGA
PDTST
DEG_SPOP_SBC_1
0.0556
p.R121C
DO8119
COAD
ICGC
PDTST
DEG_SPOP_SBC_1
0.0556
p.R121S
TCGA-BF-A1PZ
SKCM
TCGA
PDTST
DEG_SPOP_SBC_1
0.0556
p.R121S
DO50279
SKCM
ICGC
PDTST
DEG_SPOP_SBC_1
0.0556
p.R124L
DO228976
LICA
ICGC
PDTST
DEG_SPOP_SBC_1
0.1389
p.R124Q
ACH-001548
Neuroblastoma
CCLE
PDTST
DEG_SPOP_SBC_1
0.1389
p.S143F
ACH-002045
Head and Neck Cancer
CCLE
PDTST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with LURAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46821
Microtubule-associated protein 1B
DEG_SPOP_SBC_1
2035:2039
PDTST
SPOP
0.9975
More...
P52756
RNA-binding protein 5
DEG_SPOP_SBC_1
457:461
PDTST
SPOP
0.9481
More...
Q7Z7G8
Intermembrane lipid transfer protein VPS13B
DEG_SPOP_SBC_1
1274:1278
PDTST
SPOP
0.8975
More...
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
229:233
PDTST
SPOP
0.8141
More...
Q8WZ75
Roundabout homolog 4
DEG_SPOP_SBC_1
576:580
PDTST
SPOP
0.9187
More...
Q92794
Histone acetyltransferase KAT6A
DEG_SPOP_SBC_1
1140:1144
PDTST
SPOP
0.9558
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
236:240
PDTST
SPOP
0.9814
More...
Q96GD3
Polycomb protein SCMH1
DEG_SPOP_SBC_1
337:341
PDTST
SPOP
0.9895
More...
Q96LR2
Leucine rich adaptor protein 1
DEG_SPOP_SBC_1
131:135
PDTST
SPOP
0.9852
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
676:680
PDTST
SPOP
0.9536
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
801:805
PDTST
SPOP
0.9687
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.9775
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.5006
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
315:319
PDTST
SPOP
0.5384
More...
Q8N9M1
Uncharacterized protein C19orf47
DEG_SPOP_SBC_1
160:164
PDTST
SPOP
0.9381
More...