DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PETTT
Uniprot ID:
P57071
Source protein:
PR domain zinc finger protein 15
Source gene:
PRDM15
Class:
DEG_SPOP_SBC_1
Location:
1263:1267
E3 ligase:
SPOP
DEGRON score:
0.74
ASA_SCORE:
82.46
COIL:
0.6998
CONS_SCORE:
0.6017
DSS_SCORE:
0.3847
HELIX:
0.1106
FCONS_SCORE:
0.9533
RIG_SCORE:
0.7645
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1276I
TCGA-B5-A1MU
UCEC
TCGA
PETTT
DEG_SPOP_SBC_1
0.0833
p.A1270T
TCGA-B5-A3FC
UCEC
TCGA
PETTT
DEG_SPOP_SBC_1
0.25
p.A1253V
SIDM02021
Esophageal Carcinoma
GDSC
PETTT
DEG_SPOP_SBC_1
0.0556
p.D1257N
SIDM01525
Acute Myeloid Leukemia
GDSC
PETTT
DEG_SPOP_SBC_1
0.1667
p.D1257N
ACH-000557
Leukemia
CCLE
PETTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PRDM15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94817
Ubiquitin-like protein ATG12
DEG_SPOP_SBC_1
27:31
PETTT
SPOP
0.8998
More...
P07498
Kappa-casein
DEG_SPOP_SBC_1
170:174
PETTT
SPOP
0.991
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1844:1848
PETTT
SPOP
0.7668
More...
P57071
PR domain zinc finger protein 15
DEG_SPOP_SBC_1
1263:1267
PETTT
SPOP
0.74
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
984:988
PETTT
SPOP
0.91
More...
Q08379
Golgin subfamily A member 2
DEG_SPOP_SBC_1
56:60
PETTT
SPOP
0.8756
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11177:11181
PETTT
SPOP
0.6393
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11429:11433
PETTT
SPOP
0.8471
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
928:932
PETTT
SPOP
0.9958
More...
Q9NYA3
Golgin subfamily A member 6A
DEG_SPOP_SBC_1
55:59
PETTT
SPOP
0.6277
More...
Q9UHW9
Solute carrier family 12 member 6
DEG_SPOP_SBC_1
4:8
PETTT
SPOP
0.9865
More...
Q8N9W4
Golgin subfamily A member 6-like protein 2
DEG_SPOP_SBC_1
58:62
PETTT
SPOP
0.9524
More...
A6NDN3
Golgin subfamily A member 6B
DEG_SPOP_SBC_1
55:59
PETTT
SPOP
0.9725
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
602:606
PETTT
SPOP
0.8571
More...
Q63HN1
Putative protein FAM205B
DEG_SPOP_SBC_1
292:296
PETTT
SPOP
0.5845
More...
Q6ZU69
Protein FAM205A
DEG_SPOP_SBC_1
562:566
PETTT
SPOP
0.6816
More...