DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PETTT
Uniprot ID:
Q8N9W4
Source protein:
Golgin subfamily A member 6-like protein 2
Source gene:
GOLGA6L2
Class:
DEG_SPOP_SBC_1
Location:
58:62
E3 ligase:
SPOP
DEGRON score:
0.9524
ASA_SCORE:
91.3
COIL:
0.7302
CONS_SCORE:
0.3697
DSS_SCORE:
0.6821
HELIX:
0.0388
FCONS_SCORE:
1.5324
RIG_SCORE:
0.6181
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S63L
TCGA-AX-A05Z
UCEC
TCGA
PETTT
DEG_SPOP_SBC_1
0.3056
p.S63L
DO40884
UCEC
ICGC
PETTT
DEG_SPOP_SBC_1
0.3056
p.E64D
TCGA-QN-A5NN
UCS
TCGA
PETTT
DEG_SPOP_SBC_1
0.2778
p.N54H
DO229016
COCA
ICGC
PETTT
DEG_SPOP_SBC_1
0.2222
p.N54H
DO231233
LAML
ICGC
PETTT
DEG_SPOP_SBC_1
0.2222
p.N54H
DO228952
LICA
ICGC
PETTT
DEG_SPOP_SBC_1
0.2222
p.T72K
DO229052
LICA
ICGC
PETTT
DEG_SPOP_SBC_1
0.0556
p.R51Q
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
PETTT
DEG_SPOP_SBC_1
0.25
p.R58Q
CL-40
large_intestine
COSMIC
PETTT
DEG_SPOP_SBC_1
0.7329
p.R64Q
NCI-H358
lung
COSMIC
PETTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with GOLGA6L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PETTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94817
Ubiquitin-like protein ATG12
DEG_SPOP_SBC_1
27:31
PETTT
SPOP
0.8998
More...
P07498
Kappa-casein
DEG_SPOP_SBC_1
170:174
PETTT
SPOP
0.991
More...
P13611
Versican core protein
DEG_SPOP_SBC_1
1844:1848
PETTT
SPOP
0.7668
More...
P57071
PR domain zinc finger protein 15
DEG_SPOP_SBC_1
1263:1267
PETTT
SPOP
0.74
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
984:988
PETTT
SPOP
0.91
More...
Q08379
Golgin subfamily A member 2
DEG_SPOP_SBC_1
56:60
PETTT
SPOP
0.8756
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11177:11181
PETTT
SPOP
0.6393
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11429:11433
PETTT
SPOP
0.8471
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
928:932
PETTT
SPOP
0.9958
More...
Q9NYA3
Golgin subfamily A member 6A
DEG_SPOP_SBC_1
55:59
PETTT
SPOP
0.6277
More...
Q9UHW9
Solute carrier family 12 member 6
DEG_SPOP_SBC_1
4:8
PETTT
SPOP
0.9865
More...
Q8N9W4
Golgin subfamily A member 6-like protein 2
DEG_SPOP_SBC_1
58:62
PETTT
SPOP
0.9524
More...
A6NDN3
Golgin subfamily A member 6B
DEG_SPOP_SBC_1
55:59
PETTT
SPOP
0.9725
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
602:606
PETTT
SPOP
0.8571
More...
Q63HN1
Putative protein FAM205B
DEG_SPOP_SBC_1
292:296
PETTT
SPOP
0.5845
More...
Q6ZU69
Protein FAM205A
DEG_SPOP_SBC_1
562:566
PETTT
SPOP
0.6816
More...