DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTTS
Uniprot ID:
Q8NFW1
Source protein:
Collagen alpha-1
Source gene:
COL22A1
Class:
DEG_SPOP_SBC_1
Location:
851:855
E3 ligase:
SPOP
DEGRON score:
0.8684
ASA_SCORE:
64.88
COIL:
0.9062
CONS_SCORE:
0.4482
DSS_SCORE:
0.8463
HELIX:
0.0348
FCONS_SCORE:
0.9017
RIG_SCORE:
0.5818
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T854I
TCGA-17-Z042
LUAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.7078
p.P864H
TCGA-55-7574
LUAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.0833
p.P864H
DO229006
LICA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0833
p.P864H
DO23986
LUAD
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0833
p.S855F
TCGA-A2-A0CR
BRCA
TCGA
PGTTS
DEG_SPOP_SBC_1
0.7982
p.S855F
DO44163
BRCA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.7982
p.R862W
TCGA-AA-3861
COAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1389
p.R862W
DO9562
COAD
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1389
p.R862W
DO233898
GACA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1389
p.P847S
TCGA-D3-A8GM
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.2222
p.P847S
TCGA-R6-A6XQ
ESCA
TCGA
PGTTS
DEG_SPOP_SBC_1
0.2222
p.P847S
DO50288
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.2222
p.L850V
TCGA-D7-6822
STAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.3056
p.L850V
DO38423
STAD
ICGC
PGTTS
DEG_SPOP_SBC_1
0.3056
p.P851S
TCGA-D9-A1JX
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.6752
p.P851S
DO37711
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.6752
p.M863I
TCGA-OR-A5KB
ACC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1111
p.P864L
DO233276
GACA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0833
p.P844S
DO231724
LINC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1389
p.E841K
DO23498
LINC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0556
p.A842T
DO231204
LUSC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0833
p.T853N
DO32819
PACA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.7055
p.T853N
SIDM01136
Pancreatic Carcinoma
GDSC
PGTTS
DEG_SPOP_SBC_1
0.7055
p.T853N
PANC-08-13
pancreas
COSMIC
PGTTS
DEG_SPOP_SBC_1
0.7055
p.S855Y
SIDM01156
Small Cell Lung Carcinoma
GDSC
PGTTS
DEG_SPOP_SBC_1
0.712
p.S855Y
ACH-000890
Lung Cancer
CCLE
PGTTS
DEG_SPOP_SBC_1
0.712
p.R862L
SIDM01103
Squamous Cell Lung Carcinoma
GDSC
PGTTS
DEG_SPOP_SBC_1
0.1389
p.R862L
ACH-000665
Lung Cancer
CCLE
PGTTS
DEG_SPOP_SBC_1
0.1389
p.R862L
SK-MES-1
lung
COSMIC
PGTTS
DEG_SPOP_SBC_1
0.1389
p.G846D
ACH-000512
Myeloma
CCLE
PGTTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with COL22A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDV4
Transmembrane protein 8B
DEG_SPOP_SBC_1
26:30
PGTTS
SPOP
0.948
More...
P11831
Serum response factor
DEG_SPOP_SBC_1
273:277
PGTTS
SPOP
0.9973
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2832:2836
PGTTS
SPOP
0.6952
More...
Q5TBA9
Protein furry homolog
DEG_SPOP_SBC_1
1963:1967
PGTTS
SPOP
0.8986
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1426:1430
PGTTS
SPOP
0.5627
More...
Q8IZD2
Inactive histone-lysine N-methyltransferase 2E
DEG_SPOP_SBC_1
1591:1595
PGTTS
SPOP
0.9888
More...
Q8N0Y2
Zinc finger protein 444
DEG_SPOP_SBC_1
176:180
PGTTS
SPOP
0.5828
More...
Q8NFW1
Collagen alpha-1
DEG_SPOP_SBC_1
851:855
PGTTS
SPOP
0.8684
More...
Q9BQI5
SH3-containing GRB2-like protein 3-interacting protein 1
DEG_SPOP_SBC_1
434:438
PGTTS
SPOP
0.9249
More...
Q9UGL1
Lysine-specific demethylase 5B
DEG_SPOP_SBC_1
1308:1312
PGTTS
SPOP
0.888
More...
Q9UKU6
Thyrotropin-releasing hormone-degrading ectoenzyme
DEG_SPOP_SBC_1
117:121
PGTTS
SPOP
0.9471
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1602:1606
PGTTS
SPOP
0.9335
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
313:317
PGTTS
SPOP
0.9196
More...
Q9UQR0
Sex comb on midleg-like protein 2
DEG_SPOP_SBC_1
578:582
PGTTS
SPOP
0.9989
More...
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_SPOP_SBC_1
462:466
PGTTS
SPOP
0.9976
More...