DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTTS
Uniprot ID:
Q9UQ35
Source protein:
Serine/arginine repetitive matrix protein 2
Source gene:
SRRM2
Class:
DEG_SPOP_SBC_1
Location:
313:317
E3 ligase:
SPOP
DEGRON score:
0.9196
ASA_SCORE:
86.92
COIL:
0.9592
CONS_SCORE:
0.3773
DSS_SCORE:
0.8525
HELIX:
0.0242
FCONS_SCORE:
0.944
RIG_SCORE:
0.5205
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A308V
TCGA-A5-A1OF
UCEC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1944
p.A308V
DO42568
UCEC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1944
p.R303H
TCGA-A6-2686
COAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.0556
p.R303H
DO7828
COAD
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0556
p.R303H
DO228546
LICA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0556
p.G304R
TCGA-CG-5723
STAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.0833
p.G304R
DO38376
STAD
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0833
p.R320Q
TCGA-EO-A22U
UCEC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.25
p.R320Q
DO43755
UCEC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.25
p.P324Q
TCGA-GN-A26D
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1389
p.P324Q
DO37480
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1389
p.P309T
DO233089
GACA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.2222
p.R303L
DO229035
LICA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0556
p.E305D
DO232048
ORCA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1111
p.S311G
SIDM00032
Bladder Carcinoma
GDSC
PGTTS
DEG_SPOP_SBC_1
0.7222
p.S311G
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
PGTTS
DEG_SPOP_SBC_1
0.7222
p.S311G
SIDM00785
Acute Myeloid Leukemia
GDSC
PGTTS
DEG_SPOP_SBC_1
0.7222
p.S311G
SIDM01686
Chronic Myelogenous Leukemia
GDSC
PGTTS
DEG_SPOP_SBC_1
0.7222
p.S311G
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
PGTTS
DEG_SPOP_SBC_1
0.7222
p.A327V
NCI-H630
large_intestine
COSMIC
PGTTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with SRRM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDV4
Transmembrane protein 8B
DEG_SPOP_SBC_1
26:30
PGTTS
SPOP
0.948
More...
P11831
Serum response factor
DEG_SPOP_SBC_1
273:277
PGTTS
SPOP
0.9973
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2832:2836
PGTTS
SPOP
0.6952
More...
Q5TBA9
Protein furry homolog
DEG_SPOP_SBC_1
1963:1967
PGTTS
SPOP
0.8986
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1426:1430
PGTTS
SPOP
0.5627
More...
Q8IZD2
Inactive histone-lysine N-methyltransferase 2E
DEG_SPOP_SBC_1
1591:1595
PGTTS
SPOP
0.9888
More...
Q8N0Y2
Zinc finger protein 444
DEG_SPOP_SBC_1
176:180
PGTTS
SPOP
0.5828
More...
Q8NFW1
Collagen alpha-1
DEG_SPOP_SBC_1
851:855
PGTTS
SPOP
0.8684
More...
Q9BQI5
SH3-containing GRB2-like protein 3-interacting protein 1
DEG_SPOP_SBC_1
434:438
PGTTS
SPOP
0.9249
More...
Q9UGL1
Lysine-specific demethylase 5B
DEG_SPOP_SBC_1
1308:1312
PGTTS
SPOP
0.888
More...
Q9UKU6
Thyrotropin-releasing hormone-degrading ectoenzyme
DEG_SPOP_SBC_1
117:121
PGTTS
SPOP
0.9471
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1602:1606
PGTTS
SPOP
0.9335
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
313:317
PGTTS
SPOP
0.9196
More...
Q9UQR0
Sex comb on midleg-like protein 2
DEG_SPOP_SBC_1
578:582
PGTTS
SPOP
0.9989
More...
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_SPOP_SBC_1
462:466
PGTTS
SPOP
0.9976
More...