DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PGTTS
Uniprot ID:
Q9UQR0
Source protein:
Sex comb on midleg-like protein 2
Source gene:
SCML2
Class:
DEG_SPOP_SBC_1
Location:
578:582
E3 ligase:
SPOP
DEGRON score:
0.9989
ASA_SCORE:
73.76
COIL:
0.9402
CONS_SCORE:
0.6851
DSS_SCORE:
0.541
HELIX:
0.0188
FCONS_SCORE:
1.0083
RIG_SCORE:
0.5958
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L585Q
TCGA-17-Z017
LUAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.25
p.D588Y
TCGA-A5-A0G2
UCEC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1667
p.D588Y
DO41235
UCEC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1667
p.V569F
TCGA-AX-A1C7
UCEC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.0833
p.V569F
DO41115
UCEC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.0833
p.G579D
TCGA-B5-A0JY
UCEC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.6087
p.G579D
DO43041
UCEC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.6087
p.V577A
TCGA-BR-6452
STAD
TCGA
PGTTS
DEG_SPOP_SBC_1
0.3056
p.V577A
DO38404
STAD
ICGC
PGTTS
DEG_SPOP_SBC_1
0.3056
p.D572N
TCGA-DA-A1HW
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1667
p.D572N
TCGA-FR-A726
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1667
p.D572N
DO48665
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1667
p.D572N
DO38129
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1667
p.L585I
TCGA-E9-A22B
BRCA
TCGA
PGTTS
DEG_SPOP_SBC_1
0.25
p.L585I
DO1454
BRCA
ICGC
PGTTS
DEG_SPOP_SBC_1
0.25
p.G587V
TCGA-ER-A19N
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1944
p.G587V
DO37452
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1944
p.G587W
TCGA-GN-A265
SKCM
TCGA
PGTTS
DEG_SPOP_SBC_1
0.1944
p.G587W
DO37491
SKCM
ICGC
PGTTS
DEG_SPOP_SBC_1
0.1944
p.V586F
TCGA-LA-A446
LUSC
TCGA
PGTTS
DEG_SPOP_SBC_1
0.2222
p.V586F
DO45450
LUSC
ICGC
PGTTS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with SCML2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NDV4
Transmembrane protein 8B
DEG_SPOP_SBC_1
26:30
PGTTS
SPOP
0.948
More...
P11831
Serum response factor
DEG_SPOP_SBC_1
273:277
PGTTS
SPOP
0.9973
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2832:2836
PGTTS
SPOP
0.6952
More...
Q5TBA9
Protein furry homolog
DEG_SPOP_SBC_1
1963:1967
PGTTS
SPOP
0.8986
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1426:1430
PGTTS
SPOP
0.5627
More...
Q8IZD2
Inactive histone-lysine N-methyltransferase 2E
DEG_SPOP_SBC_1
1591:1595
PGTTS
SPOP
0.9888
More...
Q8N0Y2
Zinc finger protein 444
DEG_SPOP_SBC_1
176:180
PGTTS
SPOP
0.5828
More...
Q8NFW1
Collagen alpha-1
DEG_SPOP_SBC_1
851:855
PGTTS
SPOP
0.8684
More...
Q9BQI5
SH3-containing GRB2-like protein 3-interacting protein 1
DEG_SPOP_SBC_1
434:438
PGTTS
SPOP
0.9249
More...
Q9UGL1
Lysine-specific demethylase 5B
DEG_SPOP_SBC_1
1308:1312
PGTTS
SPOP
0.888
More...
Q9UKU6
Thyrotropin-releasing hormone-degrading ectoenzyme
DEG_SPOP_SBC_1
117:121
PGTTS
SPOP
0.9471
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1602:1606
PGTTS
SPOP
0.9335
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
313:317
PGTTS
SPOP
0.9196
More...
Q9UQR0
Sex comb on midleg-like protein 2
DEG_SPOP_SBC_1
578:582
PGTTS
SPOP
0.9989
More...
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_SPOP_SBC_1
462:466
PGTTS
SPOP
0.9976
More...