DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VLSTS
Uniprot ID:
Q32MK0
Source protein:
Myosin light chain kinase 3
Source gene:
MYLK3
Class:
DEG_SPOP_SBC_1
Location:
174:178
E3 ligase:
SPOP
DEGRON score:
0.9947
ASA_SCORE:
75.1
COIL:
0.819
CONS_SCORE:
0.5487
DSS_SCORE:
0.7471
HELIX:
0.0732
FCONS_SCORE:
1.3479
RIG_SCORE:
0.6425
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P187S
TCGA-B5-A3FA
UCEC
TCGA
VLSTS
DEG_SPOP_SBC_1
0.0833
p.P187S
DO52402
UCEC
ICGC
VLSTS
DEG_SPOP_SBC_1
0.0833
p.G169E
TCGA-BH-A0EB
BRCA
TCGA
VLSTS
DEG_SPOP_SBC_1
0.1944
p.G169E
DO1284
BRCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1944
p.P171L
TCGA-D3-A3C7
SKCM
TCGA
VLSTS
DEG_SPOP_SBC_1
0.25
p.P171L
DO47569
SKCM
ICGC
VLSTS
DEG_SPOP_SBC_1
0.25
p.S176N
TCGA-EO-A22R
UCEC
TCGA
VLSTS
DEG_SPOP_SBC_1
0.7069
p.S176N
DO42713
UCEC
ICGC
VLSTS
DEG_SPOP_SBC_1
0.7069
p.E186K
TCGA-GV-A3QH
BLCA
TCGA
VLSTS
DEG_SPOP_SBC_1
0.1111
p.E186K
DO464
BLCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1111
p.S169C
DO856
BLCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1944
p.A184D
DO229015
LICA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1667
p.E178K
DO222731
MELA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.7022
p.L175Q
DO48944
PBCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.6654
p.E186Q
SIDM00704
Small Cell Lung Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.1111
p.E186Q
ACH-000639
Lung Cancer
CCLE
VLSTS
DEG_SPOP_SBC_1
0.1111
p.E186Q
NCI-H211
lung
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.1111
p.R184Q
ACH-000599
Pancreatic Cancer
CCLE
VLSTS
DEG_SPOP_SBC_1
0.1667
p.R184Q
PA-TU-8902
pancreas
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.1667
p.G183C
DOHH-2
haematopoietic_and_lymphoid_tissue
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with MYLK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16144
Integrin beta-4
DEG_SPOP_SBC_1
1481:1485
VLSTS
SPOP
0.7831
More...
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
334:338
VLSTS
SPOP
0.5966
More...
Q32MK0
Myosin light chain kinase 3
DEG_SPOP_SBC_1
174:178
VLSTS
SPOP
0.9947
More...
Q6IPM2
IQ domain-containing protein E
DEG_SPOP_SBC_1
318:322
VLSTS
SPOP
0.5759
More...
Q6ZMZ0
E3 ubiquitin-protein ligase RNF19B
DEG_SPOP_SBC_1
492:496
VLSTS
SPOP
0.944
More...
Q7KZI7
Serine/threonine-protein kinase MARK2
DEG_SPOP_SBC_1
475:479
VLSTS
SPOP
0.9918
More...
Q7Z460
CLIP-associating protein 1
DEG_SPOP_SBC_1
793:797
VLSTS
SPOP
0.9931
More...
Q8TEJ3
E3 ubiquitin-protein ligase SH3RF3
DEG_SPOP_SBC_1
696:700
VLSTS
SPOP
0.9715
More...
Q92540
Nonsense-mediated mRNA decay factor SMG7
DEG_SPOP_SBC_1
526:530
VLSTS
SPOP
0.9999
More...
Q96LA8
Protein arginine N-methyltransferase 6
DEG_SPOP_SBC_1
306:310
VLSTS
SPOP
0.5624
More...
Q9H0E7
Ubiquitin carboxyl-terminal hydrolase 44
DEG_SPOP_SBC_1
245:249
VLSTS
SPOP
0.9886
More...
Q9P275
Ubiquitin carboxyl-terminal hydrolase 36
DEG_SPOP_SBC_1
578:582
VLSTS
SPOP
0.9967
More...
Q9UNZ2
NSFL1 cofactor p47
DEG_SPOP_SBC_1
267:271
VLSTS
SPOP
0.7502
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
687:691
VLSTS
SPOP
0.5563
More...