DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VLSTS
Uniprot ID:
Q5T8P6
Source protein:
RNA-binding protein 26
Source gene:
RBM26
Class:
DEG_SPOP_SBC_1
Location:
687:691
E3 ligase:
SPOP
DEGRON score:
0.5563
ASA_SCORE:
70.48
COIL:
0.703
CONS_SCORE:
0.2328
DSS_SCORE:
0.2989
HELIX:
0.1786
FCONS_SCORE:
0.8287
RIG_SCORE:
0.762
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S690F
DO233718
GACA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.7982
p.S687Y
TCGA-55-8507
LUAD
TCGA
VLSTS
DEG_SPOP_SBC_1
0.712
p.S690Y
DO45412
LUAD
ICGC
VLSTS
DEG_SPOP_SBC_1
0.712
p.A696T
TCGA-EO-A22X
UCEC
TCGA
VLSTS
DEG_SPOP_SBC_1
0.3056
p.S692Y
DO228944
LICA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.V698M
DU-145
prostate
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.1389
p.A699E
DO229015
LICA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1111
p.A699E
DO229224
THCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1111
p.A699T
DO43907
UCEC
ICGC
VLSTS
DEG_SPOP_SBC_1
0.1111
p.Q700K
DO229224
THCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.0833
p.V700M
SIDM00120
Prostate Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.0833
p.V700M
DU-145
prostate
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.0833
Showing 1 to 12 of 12 entries
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Drug responses associated with RBM26 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VLSTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
334:338
VLSTS
SPOP
0.5966
More...
Q7Z460
CLIP-associating protein 1
DEG_SPOP_SBC_1
793:797
VLSTS
SPOP
0.9931
More...
Q6ZMZ0
E3 ubiquitin-protein ligase RNF19B
DEG_SPOP_SBC_1
492:496
VLSTS
SPOP
0.944
More...
Q8TEJ3
E3 ubiquitin-protein ligase SH3RF3
DEG_SPOP_SBC_1
696:700
VLSTS
SPOP
0.9715
More...
P16144
Integrin beta-4
DEG_SPOP_SBC_1
1481:1485
VLSTS
SPOP
0.7831
More...
Q6IPM2
IQ domain-containing protein E
DEG_SPOP_SBC_1
318:322
VLSTS
SPOP
0.5759
More...
Q32MK0
Myosin light chain kinase 3
DEG_SPOP_SBC_1
174:178
VLSTS
SPOP
0.9947
More...
Q92540
Nonsense-mediated mRNA decay factor SMG7
DEG_SPOP_SBC_1
526:530
VLSTS
SPOP
0.9999
More...
Q9UNZ2
NSFL1 cofactor p47
DEG_SPOP_SBC_1
267:271
VLSTS
SPOP
0.7502
More...
Q96LA8
Protein arginine N-methyltransferase 6
DEG_SPOP_SBC_1
306:310
VLSTS
SPOP
0.5624
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
687:691
VLSTS
SPOP
0.5563
More...
Q7KZI7
Serine/threonine-protein kinase MARK2
DEG_SPOP_SBC_1
475:479
VLSTS
SPOP
0.9918
More...
Q9P275
Ubiquitin carboxyl-terminal hydrolase 36
DEG_SPOP_SBC_1
578:582
VLSTS
SPOP
0.9967
More...
Q9H0E7
Ubiquitin carboxyl-terminal hydrolase 44
DEG_SPOP_SBC_1
245:249
VLSTS
SPOP
0.9886
More...
Showing 1 to 14 of 14 entries
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