DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VLSTS
Uniprot ID:
Q6IPM2
Source protein:
IQ domain-containing protein E
Source gene:
IQCE
Class:
DEG_SPOP_SBC_1
Location:
318:322
E3 ligase:
SPOP
DEGRON score:
0.5759
ASA_SCORE:
74.16
COIL:
0.5208
CONS_SCORE:
0.6831
DSS_SCORE:
0.4093
HELIX:
0.4682
FCONS_SCORE:
0.9666
RIG_SCORE:
0.7358
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D316Y
TCGA-85-7710
LUSC
TCGA
VLSTS
DEG_SPOP_SBC_1
0.2778
p.P323T
TCGA-DF-A2KN
UCEC
TCGA
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R327C
DO8842
COAD
ICGC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.A312V
DO230312
COCA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.6111
p.A308S
DO229034
LICA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.0556
p.R327H
DO231075
LUSC
ICGC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.P317R
DO49080
PACA
ICGC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM01117
Small Cell Lung Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM00855
Other Sarcomas
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM00087
Plasma Cell Myeloma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM00654
Small Cell Lung Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM01112
Osteosarcoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM00529
Breast Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM01173
Rhabdomyosarcoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM00628
Breast Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.R317C
SIDM01409
Bladder Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.3056
p.L311R
SIDM00241
Breast Carcinoma
GDSC
VLSTS
DEG_SPOP_SBC_1
0.1389
p.L311R
ACH-002179
Breast Cancer
CCLE
VLSTS
DEG_SPOP_SBC_1
0.1389
p.L311R
OCUB-M
breast
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.1389
p.N308S
ACH-000982
Colon/Colorectal Cancer
CCLE
VLSTS
DEG_SPOP_SBC_1
0.0556
p.L324P
NB1
autonomic_ganglia
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.7222
p.S315L
SK-OV-3
ovary
COSMIC
VLSTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with IQCE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VLSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16144
Integrin beta-4
DEG_SPOP_SBC_1
1481:1485
VLSTS
SPOP
0.7831
More...
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
334:338
VLSTS
SPOP
0.5966
More...
Q32MK0
Myosin light chain kinase 3
DEG_SPOP_SBC_1
174:178
VLSTS
SPOP
0.9947
More...
Q6IPM2
IQ domain-containing protein E
DEG_SPOP_SBC_1
318:322
VLSTS
SPOP
0.5759
More...
Q6ZMZ0
E3 ubiquitin-protein ligase RNF19B
DEG_SPOP_SBC_1
492:496
VLSTS
SPOP
0.944
More...
Q7KZI7
Serine/threonine-protein kinase MARK2
DEG_SPOP_SBC_1
475:479
VLSTS
SPOP
0.9918
More...
Q7Z460
CLIP-associating protein 1
DEG_SPOP_SBC_1
793:797
VLSTS
SPOP
0.9931
More...
Q8TEJ3
E3 ubiquitin-protein ligase SH3RF3
DEG_SPOP_SBC_1
696:700
VLSTS
SPOP
0.9715
More...
Q92540
Nonsense-mediated mRNA decay factor SMG7
DEG_SPOP_SBC_1
526:530
VLSTS
SPOP
0.9999
More...
Q96LA8
Protein arginine N-methyltransferase 6
DEG_SPOP_SBC_1
306:310
VLSTS
SPOP
0.5624
More...
Q9H0E7
Ubiquitin carboxyl-terminal hydrolase 44
DEG_SPOP_SBC_1
245:249
VLSTS
SPOP
0.9886
More...
Q9P275
Ubiquitin carboxyl-terminal hydrolase 36
DEG_SPOP_SBC_1
578:582
VLSTS
SPOP
0.9967
More...
Q9UNZ2
NSFL1 cofactor p47
DEG_SPOP_SBC_1
267:271
VLSTS
SPOP
0.7502
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
687:691
VLSTS
SPOP
0.5563
More...