Search results: The pahtway p4478 has 112 genes in the original annotation. Currently, there are 65 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
5214PFKPATP-PFK | PFK-C | PFK-P | PFKFphosphofructokinase, platelet10p15.3-p15.2CV:PGCnp
DMG:Wockner_2014
Network
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
80312TET1CXXC6 | LCX | MLL-TET1 | TET1-MLL | bA119F7.1tet methylcytosine dioxygenase 110q21CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
5654HTRA1ARMD7 | CADASIL2 | CARASIL | HtrA | L56 | ORF480 | PRSS11HtrA serine peptidase 110q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
8519IFITM19-27 | CD225 | DSPA2a | IFI17 | LEU13interferon induced transmembrane protein 111p15.5DMG:Montano_2016
Expression
PMID:cooccur
283120H19ASM | ASM1 | BWS | D11S813E | LINC00008 | NCRNA00008 | WT2H19, imprinted maternally expressed transcript (non-protein coding)11p15.5CV:PGCnp
PMID:cooccur
2950GSTP1DFN7 | FAEES3 | GST3 | GSTP | HEL-S-22 | PIglutathione S-transferase pi 111q13CV:PGCnp
GO_Annotation
PMID:cooccur
CELL METABOLISM
2249FGF4HBGF-4 | HST | HST-1 | HSTF1 | K-FGF | KFGFfibroblast growth factor 411q13.3CV:PGCnp
DMG:Wockner_2014
79923NANOG-Nanog homeobox12p13.31CV:PGCnp
PMID:cooccur
6926TBX3TBX3-ISO | UMS | XHLT-box 312q24.21CV:GWASdb
CV:PGCnp
56163RNF17Mmip-2 | SPATA23 | TDRD4ring finger protein 1713q12.12CV:GWASdb
CV:PGCnp
5015OTX2CPHD6 | MCOPS5orthodenticle homeobox 214q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
2342FNTBFPTBfarnesyltransferase, CAAX box, beta14q23.3CV:PGCnp
6652SORDHEL-S-95n | SORD1sorbitol dehydrogenase15q15.3CV:PGCnp
DMG:Wockner_2014
29895MYLPFHUMMLC2B | MRLC2 | MYL11myosin light chain, phosphorylatable, fast skeletal muscle16p11.2DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Guipponi_2014
GO_Annotation
GSMA_IIE
4489MT1AMT1 | MT1S | MTCmetallothionein 1A16q13CV:PGCnp
DMG:Wockner_2014
124359CDYL2PCCP1chromodomain protein, Y-like 216q23.2CV:GWASdb
CV:PGCnp
100170841C17orf96PRR28chromosome 17 open reading frame 9617q12CV:PGCnp
10241CALCOCO2NDP52calcium binding and coiled-coil domain 217q21.32CV:PGCnp
3613IMPA2-inositol(myo)-1(or 4)-monophosphatase 218p11.2Association
CV:PGCnp
CV:PheWAS
PMID:cooccur
284217LAMA1LAMA | PTBHS | S-LAM-alphalaminin subunit alpha 118p11.3CV:PGCnp
DNM:Girard_2011
GO_Annotation
CompositeSet
10365KLF2LKLFKruppel-like factor 219p13.11CV:PGCnp
PMID:cooccur
29785CYP2S1CYPIIS1cytochrome P450 family 2 subfamily S member 119q13.1CV:PGCnp
DMG:Wockner_2014
Expression
7772ZNF229-zinc finger protein 22919q13.31CV:PGCnp
DNM:Xu_2012
CompositeSet
4343MOV10fSAP113 | gb110Mov10 RISC complex RNA helicase1p13.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
9829DNAJC6DJC6 | PARK19DnaJ heat shock protein family (Hsp40) member C61p31.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_IIA
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2170FABP3FABP11 | H-FABP | M-FABP | MDGI | O-FABPfatty acid binding protein 31p33-p32CV:PGCnp
PMID:cooccur
7805LAPTM5CLAST6lysosomal protein transmembrane 51p34CV:PGCnp
2707GJB3CX31 | DFNA2 | DFNA2B | EKVgap junction protein beta 31p34CV:PGCnp
DMG:Jaffe_2016
57085AGTRAPATRAPangiotensin II receptor associated protein1p36.22CV:GWAScat
CV:GWASdb
CV:PGCnp
80896NPLC112 | C1orf13 | NAL | NPL1N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)1q25CV:GWASdb
CV:PGCnp
PMID:cooccur
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
57761TRIB3C20orf97 | NIPK | SINK | SKIP3 | TRB3tribbles pseudokinase 320p13-p12.2CV:PGCnp
Network
PMID:cooccur
58494JAM2C21orf43 | CD322 | JAM-B | JAMB | PRO245 | VE-JAM | VEJAMjunctional adhesion molecule 221q21.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
326AIREAIRE1 | APECED | APS1 | APSI | PGA1autoimmune regulator21q22.3CV:GWASdb
CV:PGCnp
11077HSF2BP-heat shock transcription factor 2 binding protein21q22.3CV:PGCnp
29947DNMT3L-DNA (cytosine-5-)-methyltransferase 3-like21q22.3CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
400916CHCHD10C22orf16 | FTDALS2 | IMMD | N27C7-4 | SMAJcoiled-coil-helix-coiled-coil-helix domain containing 1022q11.23CV:PGCnp
DMG:Wockner_2014
79019CENPMC22orf18 | CENP-M | PANE1centromere protein M22q13.2CV:PGC128
CV:PGCnp
2034EPAS1ECYT4 | HIF2A | HLF | MOP2 | PASD2 | bHLHe73endothelial PAS domain protein 12p21-p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
29842TFCP2L1CRTR1 | LBP-9 | LBP9transcription factor CP2-like 12q14CV:PGCnp
DNM:McCarthy_2014
Expression
GSMA_I
GSMA_IIA
23314SATB2GLSSSATB homeobox 22q33CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Chromatin Remodeling Genes
788SLC25A20CAC | CACTsolute carrier family 25 member 203p21.31CV:PGCnp
DMG:Wockner_2014
Expression
79442LRRC2-leucine rich repeat containing 23p21.31CV:PGCnp
55287TMEM40-transmembrane protein 403p25.2CV:PGCnp
GSMA_I
116832RPL39LRPL39L1ribosomal protein L39 like3q27CV:PGCnp
DEG:Maycox_2009
DEG:Sanders_2013
6696SPP1BNSP | BSPI | ETA-1 | OPNsecreted phosphoprotein 14q22.1CV:PGCnp
CV:PheWAS
4126MANBAMANB1mannosidase beta4q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
54790TET2KIAA1546 | MDStet methylcytosine dioxygenase 24q24CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
54545MTMR123-PAP | PIP3APmyotubularin related protein 125p13.3CV:PGCnp
PMID:cooccur
5813PURAMRD31 | PUR-ALPHA | PUR1 | PURALPHApurine-rich element binding protein A5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
988CDC5LCDC5 | CDC5-LIKE | CEF1 | PCDC5RP | dJ319D22.1cell division cycle 5 like6p21CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Network
3710ITPR3IP3R | IP3R3inositol 1,4,5-trisphosphate receptor type 36p21CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
2030SLC29A1ENT1solute carrier family 29 member 16p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
79136LY6G6EC6orf22 | G6elymphocyte antigen 6 complex, locus G6E (pseudogene)6p21.3CV:PGCnp
23242COBL-cordon-bleu WH2 repeat protein7p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
56829ZC3HAV1ARTD13 | FLB6421 | PARP13 | ZAP | ZC3H2 | ZC3HDC2zinc finger CCCH-type containing, antiviral 17q34CV:PGCnp
56154TEX15CT42testis expressed 158p12CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
63978PRDM14PFM11PR domain 148q13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9242MSCABF-1 | ABF1 | MYOR | bHLHa22musculin8q21CV:PGCnp
PMID:cooccur
158471PRUNE2BMCC1 | BNIPXL | C9orf65 | KIAA0367prune homolog 2 (Drosophila)9q21.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur
Ascano FMRP targets
65267WNK3PRKWNK3WNK lysine deficient protein kinase 3Xp11.22CV:PGCnp
PMID:cooccur
Potential synaptic genes
10013HDAC6CPBHM | HD6 | JM21 | PPP1R90histone deacetylase 6Xp11.23CV:PGCnp
DMG:vanEijk_2014
Chromatin Remodeling Genes
Potential synaptic genes
90293KLHL13BKLHD2kelch like family member 13Xq23-q24CV:GWASdb
CV:PGCnp
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur