DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ATTTT
Uniprot ID:
P05067
Source protein:
Amyloid-beta precursor protein
Source gene:
APP
Class:
DEG_SPOP_SBC_1
Location:
273:277
E3 ligase:
SPOP
DEGRON score:
0.8121
ASA_SCORE:
85.5
COIL:
0.8864
CONS_SCORE:
0.2984
DSS_SCORE:
0.6794
HELIX:
0.0482
FCONS_SCORE:
0.9799
RIG_SCORE:
0.7255
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E285Q
TCGA-AC-A23H
BRCA
TCGA
ATTTT
DEG_SPOP_SBC_1
0.1111
p.E284K
TCGA-EE-A29D
SKCM
TCGA
ATTTT
DEG_SPOP_SBC_1
0.1389
p.T274A
TCGA-EY-A2OM
UCEC
TCGA
ATTTT
DEG_SPOP_SBC_1
0.6028
p.T274A
ACH-000963
Colon/Colorectal Cancer
CCLE
ATTTT
DEG_SPOP_SBC_1
0.6028
p.A273T
TCGA-IB-7651
PAAD
TCGA
ATTTT
DEG_SPOP_SBC_1
0.7139
p.E263K
TCGA-SJ-A6ZI
UCEC
TCGA
ATTTT
DEG_SPOP_SBC_1
0.0556
p.E263K
ACH-001356
Thyroid Cancer
CCLE
ATTTT
DEG_SPOP_SBC_1
0.0556
p.R287C
DO8264
COAD
ICGC
ATTTT
DEG_SPOP_SBC_1
0.0556
p.N276S
DO46330
OV
ICGC
ATTTT
DEG_SPOP_SBC_1
0.7069
p.A284T
DO223286
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.1389
p.M275V
EN
endometrium
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.7208
p.K285N
SK-MES-1
lung
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.1111
p.E286K
EPLC-272H
lung
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.0833
p.R283Q
COR-L105
lung
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.1667
p.Q277H
CW-2
large_intestine
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.7582
p.H278Y
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.K264N
SK-MES-1
lung
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with APP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1536:1540
ATTTT
SPOP
0.9967
More...
O94856
Neurofascin
DEG_SPOP_SBC_1
1079:1083
ATTTT
SPOP
0.901
More...
O95500
Claudin-14
DEG_SPOP_SBC_1
200:204
ATTTT
SPOP
0.8725
More...
P05067
Amyloid-beta precursor protein
DEG_SPOP_SBC_1
273:277
ATTTT
SPOP
0.8121
More...
P16989
Y-box-binding protein 3
DEG_SPOP_SBC_1
7:11
ATTTT
SPOP
0.9812
More...
P42566
Epidermal growth factor receptor substrate 15
DEG_SPOP_SBC_1
830:834
ATTTT
SPOP
0.9992
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
264:268
ATTTT
SPOP
0.979
More...
P57071
PR domain zinc finger protein 15
DEG_SPOP_SBC_1
689:693
ATTTT
SPOP
0.8785
More...
P58401
Neurexin-2-beta
DEG_SPOP_SBC_1
327:331
ATTTT
SPOP
0.9847
More...
Q16665
Hypoxia-inducible factor 1-alpha
DEG_SPOP_SBC_1
614:618
ATTTT
SPOP
0.9958
More...
Q6ZVD8
PH domain leucine-rich repeat-containing protein phosphatase 2
DEG_SPOP_SBC_1
43:47
ATTTT
SPOP
0.8865
More...
Q8IWZ3
Ankyrin repeat and KH domain-containing protein 1
DEG_SPOP_SBC_1
1509:1513
ATTTT
SPOP
0.9091
More...
Q9BVL2
Nucleoporin p58/p45
DEG_SPOP_SBC_1
160:164
ATTTT
SPOP
0.51
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1619:1623
ATTTT
SPOP
0.9887
More...
Q9HDB5
Neurexin-3-beta
DEG_SPOP_SBC_1
289:293
ATTTT
SPOP
0.986
More...
Q9NXI6
E3 ubiquitin-protein ligase RNF186
DEG_SPOP_SBC_1
17:21
ATTTT
SPOP
0.7472
More...
Q9P2S2
Neurexin-2
DEG_SPOP_SBC_1
1373:1377
ATTTT
SPOP
0.9995
More...
Q9Y4C0
Neurexin-3
DEG_SPOP_SBC_1
1294:1298
ATTTT
SPOP
0.9994
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2393:2397
ATTTT
SPOP
0.9763
More...
Q9H347
Ubiquilin-3
DEG_SPOP_SBC_1
286:290
ATTTT
SPOP
0.9975
More...