DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ATTTT
Uniprot ID:
P57071
Source protein:
PR domain zinc finger protein 15
Source gene:
PRDM15
Class:
DEG_SPOP_SBC_1
Location:
689:693
E3 ligase:
SPOP
DEGRON score:
0.8785
ASA_SCORE:
59.1
COIL:
0.463
CONS_SCORE:
0.5443
DSS_SCORE:
0.4125
HELIX:
0.0202
FCONS_SCORE:
0.7463
RIG_SCORE:
0.7319
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R679W
TCGA-EA-A410
CESC
TCGA
ATTTT
DEG_SPOP_SBC_1
0.0556
p.R679W
TCGA-VQ-A8P2
STAD
TCGA
ATTTT
DEG_SPOP_SBC_1
0.0556
p.R679W
SIDM00537
Colorectal Carcinoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.0556
p.R679W
GP5d
large_intestine
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.0556
p.H681Y
DO51734
COAD
ICGC
ATTTT
DEG_SPOP_SBC_1
0.1111
p.R699H
DO9772
COAD
ICGC
ATTTT
DEG_SPOP_SBC_1
0.1667
p.R699H
DO42312
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.1667
p.G690D
DO222363
MELA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.7198
p.K689N
DO47683
SKCM
ICGC
ATTTT
DEG_SPOP_SBC_1
0.6918
p.R698W
DO43867
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.1944
p.Y688H
DO41518
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.S697L
SIDM00578
Neuroblastoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.2222
p.S697L
SIDM01471
Chronic Myelogenous Leukemia
GDSC
ATTTT
DEG_SPOP_SBC_1
0.2222
p.S697L
SIDM01446
Glioblastoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.2222
p.S697L
SIDM01448
Head and Neck Carcinoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.2222
p.D694N
SIDM00963
Breast Carcinoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.D694N
BT-474
breast
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G690V
ACH-001622
Brain Cancer
CCLE
ATTTT
DEG_SPOP_SBC_1
0.7532
p.I682T
ACH-001738
Leukemia
CCLE
ATTTT
DEG_SPOP_SBC_1
0.1389
p.C692Y
NCI-H748
lung
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.7087
Drug responses associated with PRDM15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ATTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1536:1540
ATTTT
SPOP
0.9967
More...
O94856
Neurofascin
DEG_SPOP_SBC_1
1079:1083
ATTTT
SPOP
0.901
More...
O95500
Claudin-14
DEG_SPOP_SBC_1
200:204
ATTTT
SPOP
0.8725
More...
P05067
Amyloid-beta precursor protein
DEG_SPOP_SBC_1
273:277
ATTTT
SPOP
0.8121
More...
P16989
Y-box-binding protein 3
DEG_SPOP_SBC_1
7:11
ATTTT
SPOP
0.9812
More...
P42566
Epidermal growth factor receptor substrate 15
DEG_SPOP_SBC_1
830:834
ATTTT
SPOP
0.9992
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
264:268
ATTTT
SPOP
0.979
More...
P57071
PR domain zinc finger protein 15
DEG_SPOP_SBC_1
689:693
ATTTT
SPOP
0.8785
More...
P58401
Neurexin-2-beta
DEG_SPOP_SBC_1
327:331
ATTTT
SPOP
0.9847
More...
Q16665
Hypoxia-inducible factor 1-alpha
DEG_SPOP_SBC_1
614:618
ATTTT
SPOP
0.9958
More...
Q6ZVD8
PH domain leucine-rich repeat-containing protein phosphatase 2
DEG_SPOP_SBC_1
43:47
ATTTT
SPOP
0.8865
More...
Q8IWZ3
Ankyrin repeat and KH domain-containing protein 1
DEG_SPOP_SBC_1
1509:1513
ATTTT
SPOP
0.9091
More...
Q9BVL2
Nucleoporin p58/p45
DEG_SPOP_SBC_1
160:164
ATTTT
SPOP
0.51
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1619:1623
ATTTT
SPOP
0.9887
More...
Q9HDB5
Neurexin-3-beta
DEG_SPOP_SBC_1
289:293
ATTTT
SPOP
0.986
More...
Q9NXI6
E3 ubiquitin-protein ligase RNF186
DEG_SPOP_SBC_1
17:21
ATTTT
SPOP
0.7472
More...
Q9P2S2
Neurexin-2
DEG_SPOP_SBC_1
1373:1377
ATTTT
SPOP
0.9995
More...
Q9Y4C0
Neurexin-3
DEG_SPOP_SBC_1
1294:1298
ATTTT
SPOP
0.9994
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2393:2397
ATTTT
SPOP
0.9763
More...
Q9H347
Ubiquilin-3
DEG_SPOP_SBC_1
286:290
ATTTT
SPOP
0.9975
More...