DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ATTTT
Uniprot ID:
Q9HDB5
Source protein:
Neurexin-3-beta
Source gene:
NRXN3
Class:
DEG_SPOP_SBC_1
Location:
289:293
E3 ligase:
SPOP
DEGRON score:
0.986
ASA_SCORE:
89.06
COIL:
0.9336
CONS_SCORE:
0.4311
DSS_SCORE:
0.6063
HELIX:
0.0382
FCONS_SCORE:
1.0087
RIG_SCORE:
0.783
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R292C
SIDM00251
Gastric Carcinoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.8301
p.R292C
TGBC11TKB
stomach
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.8301
p.R290C
TGBC11TKB
stomach
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.8301
p.R291H
DO34288
PACA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.8244
p.W289L
TCGA-6A-AB49
LUSC
TCGA
ATTTT
DEG_SPOP_SBC_1
0.7015
p.W289L
DO52020
LUSC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.7015
p.G292S
ACN
autonomic_ganglia
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.6993
p.G288V
TCGA-43-8115
LUSC
TCGA
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G288V
DO26440
LUSC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G288C
DO229032
LICA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G288C
DO46591
OV
ICGC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.V288F
DO229045
LICA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G294S
SIDM00057
Neuroblastoma
GDSC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G294S
ACN
autonomic_ganglia
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G288S
ACH-000997
Colon/Colorectal Cancer
CCLE
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G288S
ACH-001061
Colon/Colorectal Cancer
CCLE
ATTTT
DEG_SPOP_SBC_1
0.3056
p.G288S
HCT-15
large_intestine
COSMIC
ATTTT
DEG_SPOP_SBC_1
0.3056
p.L287M
DO14198
HNSC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.2778
p.R286Q
DO230326
COCA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
p.R286Q
DO41644
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
p.R286Q
DO41638
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
p.R286Q
DO41458
UCEC
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
p.R286W
DO222884
COCA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
p.R286W
DO233277
GACA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
p.R286W
DO222662
MELA
ICGC
ATTTT
DEG_SPOP_SBC_1
0.25
Showing 1 to 25 of 40 entries
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Drug responses associated with NRXN3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of ATTTT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P05067
Amyloid-beta precursor protein
DEG_SPOP_SBC_1
273:277
ATTTT
SPOP
0.8121
More...
Q8IWZ3
Ankyrin repeat and KH domain-containing protein 1
DEG_SPOP_SBC_1
1509:1513
ATTTT
SPOP
0.9091
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1536:1540
ATTTT
SPOP
0.9967
More...
O95500
Claudin-14
DEG_SPOP_SBC_1
200:204
ATTTT
SPOP
0.8725
More...
Q9NXI6
E3 ubiquitin-protein ligase RNF186
DEG_SPOP_SBC_1
17:21
ATTTT
SPOP
0.7472
More...
P42566
Epidermal growth factor receptor substrate 15
DEG_SPOP_SBC_1
830:834
ATTTT
SPOP
0.9992
More...
Q16665
Hypoxia-inducible factor 1-alpha
DEG_SPOP_SBC_1
614:618
ATTTT
SPOP
0.9958
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
1619:1623
ATTTT
SPOP
0.9887
More...
Q9P2S2
Neurexin-2
DEG_SPOP_SBC_1
1373:1377
ATTTT
SPOP
0.9995
More...
P58401
Neurexin-2-beta
DEG_SPOP_SBC_1
327:331
ATTTT
SPOP
0.9847
More...
Q9Y4C0
Neurexin-3
DEG_SPOP_SBC_1
1294:1298
ATTTT
SPOP
0.9994
More...
Q9HDB5
Neurexin-3-beta
DEG_SPOP_SBC_1
289:293
ATTTT
SPOP
0.986
More...
O94856
Neurofascin
DEG_SPOP_SBC_1
1079:1083
ATTTT
SPOP
0.901
More...
Q9BVL2
Nucleoporin p58/p45
DEG_SPOP_SBC_1
160:164
ATTTT
SPOP
0.51
More...
Q6ZVD8
PH domain leucine-rich repeat-containing protein phosphatase 2
DEG_SPOP_SBC_1
43:47
ATTTT
SPOP
0.8865
More...
P57071
PR domain zinc finger protein 15
DEG_SPOP_SBC_1
689:693
ATTTT
SPOP
0.8785
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2393:2397
ATTTT
SPOP
0.9763
More...
Q9H347
Ubiquilin-3
DEG_SPOP_SBC_1
286:290
ATTTT
SPOP
0.9975
More...
P54727
UV excision repair protein RAD23 homolog B
DEG_SPOP_SBC_1
264:268
ATTTT
SPOP
0.979
More...
P16989
Y-box-binding protein 3
DEG_SPOP_SBC_1
7:11
ATTTT
SPOP
0.9812
More...
Showing 1 to 20 of 20 entries
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