DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPHY
Uniprot ID:
Q8NEA6
Source protein:
Zinc finger protein GLIS3
Source gene:
GLIS3
Class:
ITCH
Location:
680:683
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.969
ASA_SCORE:
87.55
COIL:
0.9673
CONS_SCORE:
0.5214
DSS_SCORE:
0.3556
HELIX:
0.0118
FCONS_SCORE:
0.9705
RIG_SCORE:
0.729
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P688T
TCGA-05-4396
LUAD
TCGA
PPHY
ITCH
0.1944
p.P688T
DO23838
LUAD
ICGC
PPHY
ITCH
0.1944
p.T674K
TCGA-66-2787
LUSC
TCGA
PPHY
ITCH
0.1667
p.T674K
DO229006
LICA
ICGC
PPHY
ITCH
0.1667
p.T674K
DO26647
LUSC
ICGC
PPHY
ITCH
0.1667
p.V679M
TCGA-DB-A64L
LGG
TCGA
PPHY
ITCH
0.3056
p.V679M
DO44615
LGG
ICGC
PPHY
ITCH
0.3056
p.D675N
TCGA-EE-A20C
SKCM
TCGA
PPHY
ITCH
0.1944
p.D675N
DO222775
MELA
ICGC
PPHY
ITCH
0.1944
p.D675N
DO47665
SKCM
ICGC
PPHY
ITCH
0.1944
p.D675H
TCGA-FD-A3B6
BLCA
TCGA
PPHY
ITCH
0.1944
p.D675H
DO458
BLCA
ICGC
PPHY
ITCH
0.1944
p.P688H
DO228253
MALY
ICGC
PPHY
ITCH
0.1944
p.A693D
DO46779
PAEN
ICGC
PPHY
ITCH
0.0556
p.P692L
SNU-C5
large_intestine
COSMIC
PPHY
ITCH
0.0833
Drug responses associated with GLIS3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPHY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15156
Zinc finger and BTB domain-containing protein 7B
ITCH
468:471
PPHY
ITCH,NEDD4
0.632
More...
O75081
Protein CBFA2T3
ITCH
339:342
PPHY
ITCH,NEDD4
0.9949
More...
O75618
Death effector domain-containing protein
ITCH
146:149
PPHY
ITCH,NEDD4
0.9035
More...
O75923
Dysferlin
ITCH
194:197
PPHY
ITCH,NEDD4
0.877
More...
O94855
Protein transport protein Sec24D
ITCH
23:26
PPHY
ITCH,NEDD4
0.9579
More...
P14866
Heterogeneous nuclear ribonucleoprotein L
ITCH
337:340
PPHY
ITCH,NEDD4
0.9935
More...
P56693
Transcription factor SOX-10
ITCH
366:369
PPHY
ITCH,NEDD4
0.9951
More...
P62072
Mitochondrial import inner membrane translocase subunit Tim10
ITCH
35:38
PPHY
ITCH,NEDD4
0.6439
More...
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
ITCH
1704:1707
PPHY
ITCH,NEDD4
0.6355
More...
Q13227
G protein pathway suppressor 2
ITCH
194:197
PPHY
ITCH,NEDD4
0.9693
More...
Q13621
Solute carrier family 12 member 1
ITCH
42:45
PPHY
ITCH,NEDD4
0.9792
More...
Q6W2J9
BCL-6 corepressor
ITCH
249:252
PPHY
ITCH,NEDD4
0.7281
More...
Q6ZRV2
Protein FAM83H
ITCH
21:24
PPHY
ITCH,NEDD4
0.9628
More...
Q7Z4S6
Kinesin-like protein KIF21A
ITCH
1540:1543
PPHY
ITCH,NEDD4
0.7904
More...
Q86Y56
Dynein axonemal assembly factor 5
ITCH
335:338
PPHY
ITCH,NEDD4
0.6455
More...
Q8NC67
Neuropilin and tolloid-like protein 2
ITCH
395:398
PPHY
ITCH,NEDD4
0.9529
More...
Q8NEA6
Zinc finger protein GLIS3
ITCH
680:683
PPHY
ITCH,NEDD4
0.969
More...
Q8NFH8
RalBP1-associated Eps domain-containing protein 2
ITCH
200:203
PPHY
ITCH,NEDD4
0.9985
More...
Q9NZB2
Constitutive coactivator of PPAR-gamma-like protein 1
ITCH
339:342
PPHY
ITCH,NEDD4
0.7758
More...
Q9Y2G1
Myelin regulatory factor
ITCH
195:198
PPHY
ITCH,NEDD4
0.9944
More...
Q9Y2K2
Serine/threonine-protein kinase SIK3
ITCH
939:942
PPHY
ITCH,NEDD4
0.9973
More...
Q8TF68
Zinc finger protein 384
ITCH
46:49
PPHY
ITCH,NEDD4
0.9991
More...
Q96A35
39S ribosomal protein L24, mitochondrial
ITCH
16:19
PPHY
ITCH,NEDD4
0.837
More...