DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPHY
Uniprot ID:
Q9NZB2
Source protein:
Constitutive coactivator of PPAR-gamma-like protein 1
Source gene:
FAM120A
Class:
ITCH
Location:
339:342
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.7758
ASA_SCORE:
57.6
COIL:
0.6148
CONS_SCORE:
0.2883
DSS_SCORE:
0.427
HELIX:
0.3385
FCONS_SCORE:
0.8029
RIG_SCORE:
0.716
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H338L
TCGA-55-7994
LUAD
TCGA
PPHY
ITCH
0.3056
p.H338L
DO45311
LUAD
ICGC
PPHY
ITCH
0.3056
p.Y342C
TCGA-C5-A8ZZ
CESC
TCGA
PPHY
ITCH
0.8198
p.Y342C
DO49912
CESC
ICGC
PPHY
ITCH
0.8198
p.H338Y
TCGA-EW-A1J5
BRCA
TCGA
PPHY
ITCH
0.3056
p.H338Y
DO6144
BRCA
ICGC
PPHY
ITCH
0.3056
p.H338D
DO234272
ESAD
ICGC
PPHY
ITCH
0.3056
p.P349L
SIDM02035
Colorectal Carcinoma
GDSC
PPHY
ITCH
0.1389
p.H341R
SIDM00458
Acute Myeloid Leukemia
GDSC
PPHY
ITCH
0.7133
p.H341R
ACH-000751
Leukemia
CCLE
PPHY
ITCH
0.7133
p.H341R
OCI-M1
haematopoietic_and_lymphoid_tissue
COSMIC
PPHY
ITCH
0.7133
p.S332T
ACH-000961
Endometrial/Uterine Cancer
CCLE
PPHY
ITCH
0.1389
p.K333R
ACH-000961
Endometrial/Uterine Cancer
CCLE
PPHY
ITCH
0.2778
Drug responses associated with FAM120A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPHY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15156
Zinc finger and BTB domain-containing protein 7B
ITCH
468:471
PPHY
ITCH,NEDD4
0.632
More...
O75081
Protein CBFA2T3
ITCH
339:342
PPHY
ITCH,NEDD4
0.9949
More...
O75618
Death effector domain-containing protein
ITCH
146:149
PPHY
ITCH,NEDD4
0.9035
More...
O75923
Dysferlin
ITCH
194:197
PPHY
ITCH,NEDD4
0.877
More...
O94855
Protein transport protein Sec24D
ITCH
23:26
PPHY
ITCH,NEDD4
0.9579
More...
P14866
Heterogeneous nuclear ribonucleoprotein L
ITCH
337:340
PPHY
ITCH,NEDD4
0.9935
More...
P56693
Transcription factor SOX-10
ITCH
366:369
PPHY
ITCH,NEDD4
0.9951
More...
P62072
Mitochondrial import inner membrane translocase subunit Tim10
ITCH
35:38
PPHY
ITCH,NEDD4
0.6439
More...
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
ITCH
1704:1707
PPHY
ITCH,NEDD4
0.6355
More...
Q13227
G protein pathway suppressor 2
ITCH
194:197
PPHY
ITCH,NEDD4
0.9693
More...
Q13621
Solute carrier family 12 member 1
ITCH
42:45
PPHY
ITCH,NEDD4
0.9792
More...
Q6W2J9
BCL-6 corepressor
ITCH
249:252
PPHY
ITCH,NEDD4
0.7281
More...
Q6ZRV2
Protein FAM83H
ITCH
21:24
PPHY
ITCH,NEDD4
0.9628
More...
Q7Z4S6
Kinesin-like protein KIF21A
ITCH
1540:1543
PPHY
ITCH,NEDD4
0.7904
More...
Q86Y56
Dynein axonemal assembly factor 5
ITCH
335:338
PPHY
ITCH,NEDD4
0.6455
More...
Q8NC67
Neuropilin and tolloid-like protein 2
ITCH
395:398
PPHY
ITCH,NEDD4
0.9529
More...
Q8NEA6
Zinc finger protein GLIS3
ITCH
680:683
PPHY
ITCH,NEDD4
0.969
More...
Q8NFH8
RalBP1-associated Eps domain-containing protein 2
ITCH
200:203
PPHY
ITCH,NEDD4
0.9985
More...
Q9NZB2
Constitutive coactivator of PPAR-gamma-like protein 1
ITCH
339:342
PPHY
ITCH,NEDD4
0.7758
More...
Q9Y2G1
Myelin regulatory factor
ITCH
195:198
PPHY
ITCH,NEDD4
0.9944
More...
Q9Y2K2
Serine/threonine-protein kinase SIK3
ITCH
939:942
PPHY
ITCH,NEDD4
0.9973
More...
Q8TF68
Zinc finger protein 384
ITCH
46:49
PPHY
ITCH,NEDD4
0.9991
More...
Q96A35
39S ribosomal protein L24, mitochondrial
ITCH
16:19
PPHY
ITCH,NEDD4
0.837
More...