DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTTS
Uniprot ID:
O95755
Source protein:
Ras-related protein Rab-36
Source gene:
RAB36
Class:
DEG_SPOP_SBC_1
Location:
21:25
E3 ligase:
SPOP
DEGRON score:
0.8571
ASA_SCORE:
72.6
COIL:
0.9238
CONS_SCORE:
0.1731
DSS_SCORE:
0.5931
HELIX:
0.0408
FCONS_SCORE:
1
RIG_SCORE:
0.7392
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R28C
TCGA-34-5929
LUSC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.25
p.R28C
DO26659
LUSC
ICGC
PPTTS
DEG_SPOP_SBC_1
0.25
p.T26M
TCGA-DU-6392
LGG
TCGA
PPTTS
DEG_SPOP_SBC_1
0.75
p.T26M
DO22237
LGG
ICGC
PPTTS
DEG_SPOP_SBC_1
0.75
p.R12L
TCGA-P3-A6SX
HNSC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.0833
p.R12L
DO49051
HNSC
ICGC
PPTTS
DEG_SPOP_SBC_1
0.0833
p.A14S
DO228985
LICA
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1389
p.V35L
DO229024
LICA
ICGC
PPTTS
DEG_SPOP_SBC_1
0.0556
p.P22H
SIDM00120
Prostate Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.6583
p.P22H
ACH-000979
Prostate Cancer
CCLE
PPTTS
DEG_SPOP_SBC_1
0.6583
p.P22H
DU-145
prostate
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.6583
p.V35E
SIDM00308
Chronic Myelogenous Leukemia
GDSC
PPTTS
DEG_SPOP_SBC_1
0.0556
p.V35E
SIDM00112
Kidney Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.0556
p.V35E
SIDM00241
Breast Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.0556
p.V35E
SIDM00164
Biliary Tract Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.0556
p.V35E
SIDM01694
B-Lymphoblastic Leukemia
GDSC
PPTTS
DEG_SPOP_SBC_1
0.0556
p.T23M
SIDM01088
Endometrial Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.8534
p.T23M
ACH-000965
Endometrial/Uterine Cancer
CCLE
PPTTS
DEG_SPOP_SBC_1
0.8534
p.T23M
RL95-2
endometrium
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.8534
p.S16R
SIDM01451
Pancreatic Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.1944
p.S16R
ACH-000933
Pancreatic Cancer
CCLE
PPTTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with RAB36 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15481
Melanoma-associated antigen B4
DEG_SPOP_SBC_1
66:70
PPTTS
SPOP
0.9159
More...
O95248
Myotubularin-related protein 5
DEG_SPOP_SBC_1
353:357
PPTTS
SPOP
0.8488
More...
P01106
Myc proto-oncogene protein
DEG_SPOP_SBC_1
245:249
PPTTS
SPOP
0.9673
More...
P15976
Erythroid transcription factor
DEG_SPOP_SBC_1
400:404
PPTTS
SPOP
0.9764
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1492:1496
PPTTS
SPOP
0.7371
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3135:3139
PPTTS
SPOP
0.6836
More...
Q12857
Nuclear factor 1 A-type
DEG_SPOP_SBC_1
458:462
PPTTS
SPOP
0.9881
More...
Q16549
Proprotein convertase subtilisin/kexin type 7
DEG_SPOP_SBC_1
741:745
PPTTS
SPOP
0.9748
More...
Q53TQ3
INO80 complex subunit D
DEG_SPOP_SBC_1
921:925
PPTTS
SPOP
0.9871
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
387:391
PPTTS
SPOP
0.9613
More...
Q86VF5
2-acylglycerol O-acyltransferase 3
DEG_SPOP_SBC_1
9:13
PPTTS
SPOP
0.9231
More...
Q8IZC6
Collagen alpha-1
DEG_SPOP_SBC_1
444:448
PPTTS
SPOP
0.9481
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
851:855
PPTTS
SPOP
0.9986
More...
Q96Q42
Alsin
DEG_SPOP_SBC_1
384:388
PPTTS
SPOP
0.957
More...
Q9NQX3
Gephyrin [Includes: Molybdopterin adenylyltransferase
DEG_SPOP_SBC_1
196:200
PPTTS
SPOP
0.9868
More...
Q9Y566
SH3 and multiple ankyrin repeat domains protein 1
DEG_SPOP_SBC_1
923:927
PPTTS
SPOP
0.6646
More...
A7MBM2
Protein dispatched homolog 2
DEG_SPOP_SBC_1
73:77
PPTTS
SPOP
0.8424
More...
O95755
Ras-related protein Rab-36
DEG_SPOP_SBC_1
21:25
PPTTS
SPOP
0.8571
More...
Q96LK8
Spermatogenesis-associated protein 32
DEG_SPOP_SBC_1
216:220
PPTTS
SPOP
0.7106
More...
Q8NC54
Keratinocyte-associated transmembrane protein 2
DEG_SPOP_SBC_1
89:93
PPTTS
SPOP
0.9928
More...