DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPTTS
Uniprot ID:
Q12857
Source protein:
Nuclear factor 1 A-type
Source gene:
NFIA
Class:
DEG_SPOP_SBC_1
Location:
458:462
E3 ligase:
SPOP
DEGRON score:
0.9881
ASA_SCORE:
77.78
COIL:
0.9144
CONS_SCORE:
0.4302
DSS_SCORE:
0.7456
HELIX:
0.0216
FCONS_SCORE:
0.9756
RIG_SCORE:
0.5682
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S467I
TCGA-AP-A0LM
UCEC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.1944
p.A456T
TCGA-BG-A222
UCEC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.2778
p.A456V
TCGA-DK-A6AW
BLCA
TCGA
PPTTS
DEG_SPOP_SBC_1
0.2778
p.P467L
DO10244
COAD
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1944
p.P467L
DO43755
UCEC
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1944
p.P456R
DO233292
NACA
ICGC
PPTTS
DEG_SPOP_SBC_1
0.2778
p.P452R
DO37551
SKCM
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1667
p.P453Q
DO37491
SKCM
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1944
p.P453Q
DO37443
SKCM
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1944
p.P452L
ACH-000231
Brain Cancer
CCLE
PPTTS
DEG_SPOP_SBC_1
0.1667
p.P452L
KALS-1
central_nervous_system
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.1667
p.V465I
PANC-08-13
pancreas
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.25
p.R470W
RKO
large_intestine
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.1111
p.R449W
RKO
large_intestine
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.0833
p.P461L
KMH-2
thyroid
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.7582
Drug responses associated with NFIA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15481
Melanoma-associated antigen B4
DEG_SPOP_SBC_1
66:70
PPTTS
SPOP
0.9159
More...
O95248
Myotubularin-related protein 5
DEG_SPOP_SBC_1
353:357
PPTTS
SPOP
0.8488
More...
P01106
Myc proto-oncogene protein
DEG_SPOP_SBC_1
245:249
PPTTS
SPOP
0.9673
More...
P15976
Erythroid transcription factor
DEG_SPOP_SBC_1
400:404
PPTTS
SPOP
0.9764
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1492:1496
PPTTS
SPOP
0.7371
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3135:3139
PPTTS
SPOP
0.6836
More...
Q12857
Nuclear factor 1 A-type
DEG_SPOP_SBC_1
458:462
PPTTS
SPOP
0.9881
More...
Q16549
Proprotein convertase subtilisin/kexin type 7
DEG_SPOP_SBC_1
741:745
PPTTS
SPOP
0.9748
More...
Q53TQ3
INO80 complex subunit D
DEG_SPOP_SBC_1
921:925
PPTTS
SPOP
0.9871
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
387:391
PPTTS
SPOP
0.9613
More...
Q86VF5
2-acylglycerol O-acyltransferase 3
DEG_SPOP_SBC_1
9:13
PPTTS
SPOP
0.9231
More...
Q8IZC6
Collagen alpha-1
DEG_SPOP_SBC_1
444:448
PPTTS
SPOP
0.9481
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
851:855
PPTTS
SPOP
0.9986
More...
Q96Q42
Alsin
DEG_SPOP_SBC_1
384:388
PPTTS
SPOP
0.957
More...
Q9NQX3
Gephyrin [Includes: Molybdopterin adenylyltransferase
DEG_SPOP_SBC_1
196:200
PPTTS
SPOP
0.9868
More...
Q9Y566
SH3 and multiple ankyrin repeat domains protein 1
DEG_SPOP_SBC_1
923:927
PPTTS
SPOP
0.6646
More...
A7MBM2
Protein dispatched homolog 2
DEG_SPOP_SBC_1
73:77
PPTTS
SPOP
0.8424
More...
O95755
Ras-related protein Rab-36
DEG_SPOP_SBC_1
21:25
PPTTS
SPOP
0.8571
More...
Q96LK8
Spermatogenesis-associated protein 32
DEG_SPOP_SBC_1
216:220
PPTTS
SPOP
0.7106
More...
Q8NC54
Keratinocyte-associated transmembrane protein 2
DEG_SPOP_SBC_1
89:93
PPTTS
SPOP
0.9928
More...