DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTTS
Uniprot ID:
Q9Y566
Source protein:
SH3 and multiple ankyrin repeat domains protein 1
Source gene:
SHANK1
Class:
DEG_SPOP_SBC_1
Location:
923:927
E3 ligase:
SPOP
DEGRON score:
0.6646
ASA_SCORE:
92.7
COIL:
0.98
CONS_SCORE:
0.3574
DSS_SCORE:
0.7895
HELIX:
0.008
FCONS_SCORE:
1.0218
RIG_SCORE:
0.4802
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S934N
TCGA-AP-A059
UCEC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.1389
p.S917L
TCGA-AP-A1DV
UCEC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.1667
p.S917L
DO43186
UCEC
ICGC
PPTTS
DEG_SPOP_SBC_1
0.1667
p.P929T
TCGA-CV-7242
HNSC
TCGA
PPTTS
DEG_SPOP_SBC_1
0.2778
p.P929T
DO14974
HNSC
ICGC
PPTTS
DEG_SPOP_SBC_1
0.2778
p.P923S
SIDM00217
Colorectal Carcinoma
GDSC
PPTTS
DEG_SPOP_SBC_1
0.6752
p.P923S
SNU-1040
large_intestine
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.6752
p.Y933H
ACH-000988
Endometrial/Uterine Cancer
CCLE
PPTTS
DEG_SPOP_SBC_1
0.1667
p.Y933H
MFE-319
endometrium
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.1667
p.P931S
SNU-1040
large_intestine
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.2222
p.Y924H
MFE-319
endometrium
COSMIC
PPTTS
DEG_SPOP_SBC_1
0.7229
Drug responses associated with SHANK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15481
Melanoma-associated antigen B4
DEG_SPOP_SBC_1
66:70
PPTTS
SPOP
0.9159
More...
O95248
Myotubularin-related protein 5
DEG_SPOP_SBC_1
353:357
PPTTS
SPOP
0.8488
More...
P01106
Myc proto-oncogene protein
DEG_SPOP_SBC_1
245:249
PPTTS
SPOP
0.9673
More...
P15976
Erythroid transcription factor
DEG_SPOP_SBC_1
400:404
PPTTS
SPOP
0.9764
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1492:1496
PPTTS
SPOP
0.7371
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3135:3139
PPTTS
SPOP
0.6836
More...
Q12857
Nuclear factor 1 A-type
DEG_SPOP_SBC_1
458:462
PPTTS
SPOP
0.9881
More...
Q16549
Proprotein convertase subtilisin/kexin type 7
DEG_SPOP_SBC_1
741:745
PPTTS
SPOP
0.9748
More...
Q53TQ3
INO80 complex subunit D
DEG_SPOP_SBC_1
921:925
PPTTS
SPOP
0.9871
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
387:391
PPTTS
SPOP
0.9613
More...
Q86VF5
2-acylglycerol O-acyltransferase 3
DEG_SPOP_SBC_1
9:13
PPTTS
SPOP
0.9231
More...
Q8IZC6
Collagen alpha-1
DEG_SPOP_SBC_1
444:448
PPTTS
SPOP
0.9481
More...
Q92954
Proteoglycan 4
DEG_SPOP_SBC_1
851:855
PPTTS
SPOP
0.9986
More...
Q96Q42
Alsin
DEG_SPOP_SBC_1
384:388
PPTTS
SPOP
0.957
More...
Q9NQX3
Gephyrin [Includes: Molybdopterin adenylyltransferase
DEG_SPOP_SBC_1
196:200
PPTTS
SPOP
0.9868
More...
Q9Y566
SH3 and multiple ankyrin repeat domains protein 1
DEG_SPOP_SBC_1
923:927
PPTTS
SPOP
0.6646
More...
A7MBM2
Protein dispatched homolog 2
DEG_SPOP_SBC_1
73:77
PPTTS
SPOP
0.8424
More...
O95755
Ras-related protein Rab-36
DEG_SPOP_SBC_1
21:25
PPTTS
SPOP
0.8571
More...
Q96LK8
Spermatogenesis-associated protein 32
DEG_SPOP_SBC_1
216:220
PPTTS
SPOP
0.7106
More...
Q8NC54
Keratinocyte-associated transmembrane protein 2
DEG_SPOP_SBC_1
89:93
PPTTS
SPOP
0.9928
More...