DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PTTSS
Uniprot ID:
Q8IZF0
Source protein:
Sodium leak channel NALCN
Source gene:
NALCN
Class:
DEG_SPOP_SBC_1
Location:
682:686
E3 ligase:
SPOP
DEGRON score:
0.8231
ASA_SCORE:
87.74
COIL:
0.9348
CONS_SCORE:
0.2959
DSS_SCORE:
0.3156
HELIX:
0.0456
FCONS_SCORE:
1.0866
RIG_SCORE:
0.6566
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R694C
TCGA-44-8117
LUAD
TCGA
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694C
TCGA-AZ-4682
COAD
TCGA
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694C
DO8562
COAD
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694C
DO24028
LUAD
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694C
DO35345
PACA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1111
p.T684I
TCGA-95-7567
LUAD
TCGA
PTTSS
DEG_SPOP_SBC_1
0.7078
p.T684I
DO25564
LUAD
ICGC
PTTSS
DEG_SPOP_SBC_1
0.7078
p.P682L
TCGA-A5-A0G2
UCEC
TCGA
PTTSS
DEG_SPOP_SBC_1
0.7582
p.P682L
DO41235
UCEC
ICGC
PTTSS
DEG_SPOP_SBC_1
0.7582
p.D673N
TCGA-CK-4951
COAD
TCGA
PTTSS
DEG_SPOP_SBC_1
0.0833
p.D673N
DO10582
COAD
ICGC
PTTSS
DEG_SPOP_SBC_1
0.0833
p.R694H
TCGA-DI-A0WH
UCEC
TCGA
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694H
DO228138
PBCA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694H
DO43843
UCEC
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1111
p.C676S
TCGA-E8-A242
THCA
TCGA
PTTSS
DEG_SPOP_SBC_1
0.1667
p.C676S
DO40051
THCA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1667
p.S692P
DO233144
GACA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1667
p.Q672K
DO228976
LICA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.0556
p.D690N
DO52686
MALY
ICGC
PTTSS
DEG_SPOP_SBC_1
0.2222
p.D690N
SIDM00193
Colorectal Carcinoma
GDSC
PTTSS
DEG_SPOP_SBC_1
0.2222
p.D690N
ACH-000991
Colon/Colorectal Cancer
CCLE
PTTSS
DEG_SPOP_SBC_1
0.2222
p.D690N
SNU-81
large_intestine
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.2222
p.R694S
SIDM00616
Hepatocellular Carcinoma
GDSC
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694S
ACH-000476
Liver Cancer
CCLE
PTTSS
DEG_SPOP_SBC_1
0.1111
p.R694S
JHH-4
liver
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with NALCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14776
Transcription elongation regulator 1
DEG_SPOP_SBC_1
261:265
PTTSS
SPOP
0.9948
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
549:553
PTTSS
SPOP
0.8155
More...
O60336
Mitogen-activated protein kinase-binding protein 1
DEG_SPOP_SBC_1
1250:1254
PTTSS
SPOP
0.9955
More...
P35869
Aryl hydrocarbon receptor
DEG_SPOP_SBC_1
730:734
PTTSS
SPOP
0.9973
More...
P55055
Oxysterols receptor LXR-beta
DEG_SPOP_SBC_1
4:8
PTTSS
SPOP
0.9972
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
2207:2211
PTTSS
SPOP
0.9961
More...
Q15915
Zinc finger protein ZIC 1
DEG_SPOP_SBC_1
417:421
PTTSS
SPOP
0.9909
More...
Q7Z7G0
Target of Nesh-SH3
DEG_SPOP_SBC_1
341:345
PTTSS
SPOP
0.992
More...
Q8IZF0
Sodium leak channel NALCN
DEG_SPOP_SBC_1
682:686
PTTSS
SPOP
0.8231
More...
Q8N0V3
Putative ribosome-binding factor A, mitochondrial
DEG_SPOP_SBC_1
230:234
PTTSS
SPOP
0.9938
More...
Q8N7W2
BEN domain-containing protein 7
DEG_SPOP_SBC_1
144:148
PTTSS
SPOP
0.6957
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
6756:6760
PTTSS
SPOP
0.7898
More...
Q9BRK4
Leucine zipper putative tumor suppressor 2
DEG_SPOP_SBC_1
238:242
PTTSS
SPOP
0.9196
More...
Q9H1H9
Kinesin-like protein KIF13A
DEG_SPOP_SBC_1
1590:1594
PTTSS
SPOP
0.9958
More...
Q9H254
Spectrin beta chain, non-erythrocytic 4
DEG_SPOP_SBC_1
2540:2544
PTTSS
SPOP
0.9961
More...
Q9Y5J3
Hairy/enhancer-of-split related with YRPW motif protein 1
DEG_SPOP_SBC_1
41:45
PTTSS
SPOP
0.6104
More...
Q9H3M9
Ataxin-3-like protein
DEG_SPOP_SBC_1
314:318
PTTSS
SPOP
0.999
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
21:25
PTTSS
SPOP
0.988
More...
Q5JXX7
Transmembrane protein 31
DEG_SPOP_SBC_1
60:64
PTTSS
SPOP
0.5118
More...