DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PTTSS
Uniprot ID:
Q9H1H9
Source protein:
Kinesin-like protein KIF13A
Source gene:
KIF13A
Class:
DEG_SPOP_SBC_1
Location:
1590:1594
E3 ligase:
SPOP
DEGRON score:
0.9958
ASA_SCORE:
71.92
COIL:
0.8218
CONS_SCORE:
0.338
DSS_SCORE:
0.3949
HELIX:
0.0466
FCONS_SCORE:
1.0941
RIG_SCORE:
0.6552
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1598C
TCGA-AA-A02O
COAD
TCGA
PTTSS
DEG_SPOP_SBC_1
0.2222
p.R1588H
TCGA-BW-A5NP
LIHC
TCGA
PTTSS
DEG_SPOP_SBC_1
0.2778
p.R1588H
TCGA-GR-A4D9
DLBC
TCGA
PTTSS
DEG_SPOP_SBC_1
0.2778
p.R1588L
TCGA-CV-6962
HNSC
TCGA
PTTSS
DEG_SPOP_SBC_1
0.2778
p.R1588S
TCGA-GN-A265
SKCM
TCGA
PTTSS
DEG_SPOP_SBC_1
0.2778
p.Q1591K
DO229015
LICA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.6944
p.H1600N
DO229045
LICA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1667
p.S1581C
DO24830
LUAD
ICGC
PTTSS
DEG_SPOP_SBC_1
0.0833
p.T1592M
DO232761
PBCA
ICGC
PTTSS
DEG_SPOP_SBC_1
0.7423
p.S1585L
DO37896
SKCM
ICGC
PTTSS
DEG_SPOP_SBC_1
0.1944
p.D1586N
DO50284
SKCM
ICGC
PTTSS
DEG_SPOP_SBC_1
0.2222
p.S1604L
DO43306
UCEC
ICGC
PTTSS
DEG_SPOP_SBC_1
0.0556
p.R1588C
SIDM01154
T-Lymphoblastic Leukemia
GDSC
PTTSS
DEG_SPOP_SBC_1
0.2778
p.R1588C
ACH-000953
Leukemia
CCLE
PTTSS
DEG_SPOP_SBC_1
0.2778
p.R1588C
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.2778
p.S1599F
NCI-H847
lung
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.1944
p.D1594E
COLO-741
large_intestine
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.6758
p.D1581E
COLO-741
large_intestine
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.0833
p.S1600L
NCI-H847
lung
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.1667
p.D1581H
NCI-H2342
lung
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.0833
p.D1594H
NCI-H2342
lung
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.7688
p.L1604S
SNU-1040
large_intestine
COSMIC
PTTSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with KIF13A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14776
Transcription elongation regulator 1
DEG_SPOP_SBC_1
261:265
PTTSS
SPOP
0.9948
More...
O15054
Lysine-specific demethylase 6B
DEG_SPOP_SBC_1
549:553
PTTSS
SPOP
0.8155
More...
O60336
Mitogen-activated protein kinase-binding protein 1
DEG_SPOP_SBC_1
1250:1254
PTTSS
SPOP
0.9955
More...
P35869
Aryl hydrocarbon receptor
DEG_SPOP_SBC_1
730:734
PTTSS
SPOP
0.9973
More...
P55055
Oxysterols receptor LXR-beta
DEG_SPOP_SBC_1
4:8
PTTSS
SPOP
0.9972
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
2207:2211
PTTSS
SPOP
0.9961
More...
Q15915
Zinc finger protein ZIC 1
DEG_SPOP_SBC_1
417:421
PTTSS
SPOP
0.9909
More...
Q7Z7G0
Target of Nesh-SH3
DEG_SPOP_SBC_1
341:345
PTTSS
SPOP
0.992
More...
Q8IZF0
Sodium leak channel NALCN
DEG_SPOP_SBC_1
682:686
PTTSS
SPOP
0.8231
More...
Q8N0V3
Putative ribosome-binding factor A, mitochondrial
DEG_SPOP_SBC_1
230:234
PTTSS
SPOP
0.9938
More...
Q8N7W2
BEN domain-containing protein 7
DEG_SPOP_SBC_1
144:148
PTTSS
SPOP
0.6957
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
6756:6760
PTTSS
SPOP
0.7898
More...
Q9BRK4
Leucine zipper putative tumor suppressor 2
DEG_SPOP_SBC_1
238:242
PTTSS
SPOP
0.9196
More...
Q9H1H9
Kinesin-like protein KIF13A
DEG_SPOP_SBC_1
1590:1594
PTTSS
SPOP
0.9958
More...
Q9H254
Spectrin beta chain, non-erythrocytic 4
DEG_SPOP_SBC_1
2540:2544
PTTSS
SPOP
0.9961
More...
Q9Y5J3
Hairy/enhancer-of-split related with YRPW motif protein 1
DEG_SPOP_SBC_1
41:45
PTTSS
SPOP
0.6104
More...
Q9H3M9
Ataxin-3-like protein
DEG_SPOP_SBC_1
314:318
PTTSS
SPOP
0.999
More...
O75333
T-box transcription factor TBX10
DEG_SPOP_SBC_1
21:25
PTTSS
SPOP
0.988
More...
Q5JXX7
Transmembrane protein 31
DEG_SPOP_SBC_1
60:64
PTTSS
SPOP
0.5118
More...