DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PVSST
Uniprot ID:
Q3B7T1
Source protein:
Erythroid differentiation-related factor 1
Source gene:
EDRF1
Class:
DEG_SPOP_SBC_1
Location:
221:225
E3 ligase:
SPOP
DEGRON score:
0.7254
ASA_SCORE:
78.82
COIL:
0.7736
CONS_SCORE:
0.2982
DSS_SCORE:
0.6543
HELIX:
0.1862
FCONS_SCORE:
0.8737
RIG_SCORE:
0.6763
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N214S
TCGA-23-1027
OV
TCGA
PVSST
DEG_SPOP_SBC_1
0.1389
p.D235H
TCGA-95-7947
LUAD
TCGA
PVSST
DEG_SPOP_SBC_1
0.0556
p.A219T
TCGA-BG-A222
UCEC
TCGA
PVSST
DEG_SPOP_SBC_1
0.2778
p.A219T
TCGA-BR-4184
STAD
TCGA
PVSST
DEG_SPOP_SBC_1
0.2778
p.G217V
TCGA-FJ-A3Z7
BLCA
TCGA
PVSST
DEG_SPOP_SBC_1
0.2222
p.S234L
SIDM00630
Breast Carcinoma
GDSC
PVSST
DEG_SPOP_SBC_1
0.0833
p.S223T
SIDM01780
B-Cell Non-Hodgkin's Lymphoma
GDSC
PVSST
DEG_SPOP_SBC_1
0.6005
Drug responses associated with EDRF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NKB5
Pecanex-like protein 2
DEG_SPOP_SBC_1
184:188
PVSST
SPOP
0.9588
More...
P54132
Bloom syndrome protein
DEG_SPOP_SBC_1
609:613
PVSST
SPOP
0.9925
More...
Q01484
Ankyrin-2
DEG_SPOP_SBC_1
1892:1896
PVSST
SPOP
0.8922
More...
Q3B7T1
Erythroid differentiation-related factor 1
DEG_SPOP_SBC_1
221:225
PVSST
SPOP
0.7254
More...
Q5T890
DNA excision repair protein ERCC-6-like 2
DEG_SPOP_SBC_1
1371:1375
PVSST
SPOP
0.992
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1426:1430
PVSST
SPOP
0.7323
More...
Q8NDV7
Trinucleotide repeat-containing gene 6A protein
DEG_SPOP_SBC_1
214:218
PVSST
SPOP
0.9849
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5349:5353
PVSST
SPOP
0.9376
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5644:5648
PVSST
SPOP
0.9486
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7985:7989
PVSST
SPOP
0.7091
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9158:9162
PVSST
SPOP
0.6521
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9741:9745
PVSST
SPOP
0.9179
More...
Q92794
Histone acetyltransferase KAT6A
DEG_SPOP_SBC_1
840:844
PVSST
SPOP
0.7631
More...
Q96AV8
Transcription factor E2F7
DEG_SPOP_SBC_1
767:771
PVSST
SPOP
0.9633
More...
Q96LX7
Coiled-coil domain-containing protein 17
DEG_SPOP_SBC_1
570:574
PVSST
SPOP
0.9596
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
678:682
PVSST
SPOP
0.879
More...
Q99836
Myeloid differentiation primary response protein MyD88
DEG_SPOP_SBC_1
13:17
PVSST
SPOP
0.8946
More...
Q9BXT5
Testis-expressed protein 15
DEG_SPOP_SBC_1
1137:1141
PVSST
SPOP
0.5394
More...
Q9HC35
Echinoderm microtubule-associated protein-like 4
DEG_SPOP_SBC_1
885:889
PVSST
SPOP
0.9985
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
5275:5279
PVSST
SPOP
0.9192
More...
Q9HCD5
Nuclear receptor coactivator 5
DEG_SPOP_SBC_1
527:531
PVSST
SPOP
0.9982
More...
Q9NQC3
Reticulon-4
DEG_SPOP_SBC_1
112:116
PVSST
SPOP
0.9519
More...
Q9UGN4
CMRF35-like molecule 8
DEG_SPOP_SBC_1
150:154
PVSST
SPOP
0.5101
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1348:1352
PVSST
SPOP
0.9986
More...
Q9Y493
Zonadhesin
DEG_SPOP_SBC_1
547:551
PVSST
SPOP
0.9804
More...
Q7Z2K8
G protein-regulated inducer of neurite outgrowth 1
DEG_SPOP_SBC_1
754:758
PVSST
SPOP
0.8619
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
229:233
PVSST
SPOP
0.6823
More...
P78312
Protein FAM193A
DEG_SPOP_SBC_1
862:866
PVSST
SPOP
0.6848
More...