DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PVTTS
Uniprot ID:
Q92576
Source protein:
PHD finger protein 3
Source gene:
PHF3
Class:
DEG_SPOP_SBC_1
Location:
1661:1665
E3 ligase:
SPOP
DEGRON score:
0.9211
ASA_SCORE:
81.86
COIL:
0.8522
CONS_SCORE:
0.3404
DSS_SCORE:
0.7116
HELIX:
0.0592
FCONS_SCORE:
0.9822
RIG_SCORE:
0.6164
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1671N
TCGA-17-Z031
LUAD
TCGA
PVTTS
DEG_SPOP_SBC_1
0.1667
p.R1674W
TCGA-50-5935
LUAD
TCGA
PVTTS
DEG_SPOP_SBC_1
0.0833
p.R1674W
DO23588
LUAD
ICGC
PVTTS
DEG_SPOP_SBC_1
0.0833
p.R1658Q
TCGA-AN-A046
BRCA
TCGA
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
TCGA-AP-A0LM
UCEC
TCGA
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
TCGA-BS-A0UV
UCEC
TCGA
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
TCGA-E6-A1LX
UCEC
TCGA
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
DO1285
BRCA
ICGC
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
DO43306
UCEC
ICGC
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
DO41020
UCEC
ICGC
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1658Q
DO42793
UCEC
ICGC
PVTTS
DEG_SPOP_SBC_1
0.25
p.R1674Q
SIDM00135
Breast Carcinoma
GDSC
PVTTS
DEG_SPOP_SBC_1
0.0833
p.R1674Q
SIDM00632
Non-Cancerous
GDSC
PVTTS
DEG_SPOP_SBC_1
0.0833
p.R1674Q
SIDM00676
Bladder Carcinoma
GDSC
PVTTS
DEG_SPOP_SBC_1
0.0833
p.R1674Q
SIDM01154
T-Lymphoblastic Leukemia
GDSC
PVTTS
DEG_SPOP_SBC_1
0.0833
p.V1662L
ACH-000545
Bladder Cancer
CCLE
PVTTS
DEG_SPOP_SBC_1
0.5654
Drug responses associated with PHF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95405
Zinc finger FYVE domain-containing protein 9
DEG_SPOP_SBC_1
866:870
PVTTS
SPOP
0.9916
More...
P18146
Early growth response protein 1
DEG_SPOP_SBC_1
453:457
PVTTS
SPOP
0.8941
More...
P42858
Huntingtin
DEG_SPOP_SBC_1
1218:1222
PVTTS
SPOP
0.9924
More...
Q01167
Forkhead box protein K2
DEG_SPOP_SBC_1
457:461
PVTTS
SPOP
0.9295
More...
Q15735
Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
DEG_SPOP_SBC_1
396:400
PVTTS
SPOP
0.9907
More...
Q15751
Probable E3 ubiquitin-protein ligase HERC1
DEG_SPOP_SBC_1
2633:2637
PVTTS
SPOP
0.9265
More...
Q2TAL8
Transcriptional regulator QRICH1
DEG_SPOP_SBC_1
79:83
PVTTS
SPOP
0.9415
More...
Q5T5P2
Sickle tail protein homolog
DEG_SPOP_SBC_1
1114:1118
PVTTS
SPOP
0.9913
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
541:545
PVTTS
SPOP
0.876
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
954:958
PVTTS
SPOP
0.9503
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1131:1135
PVTTS
SPOP
0.8176
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1367:1371
PVTTS
SPOP
0.5669
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1720:1724
PVTTS
SPOP
0.7511
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2250:2254
PVTTS
SPOP
0.7066
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2722:2726
PVTTS
SPOP
0.9789
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2781:2785
PVTTS
SPOP
0.7773
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2840:2844
PVTTS
SPOP
0.6573
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3135:3139
PVTTS
SPOP
0.7818
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3194:3198
PVTTS
SPOP
0.8497
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3370:3374
PVTTS
SPOP
0.9693
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3724:3728
PVTTS
SPOP
0.7788
More...
Q7Z7B0
Filamin-A-interacting protein 1
DEG_SPOP_SBC_1
1133:1137
PVTTS
SPOP
0.9971
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8904:8908
PVTTS
SPOP
0.8117
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10028:10032
PVTTS
SPOP
0.5276
More...
Q96JN0
Ligand-dependent corepressor
DEG_SPOP_SBC_1
38:42
PVTTS
SPOP
0.9743
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
346:350
PVTTS
SPOP
0.5472
More...
Q9HBL0
Tensin-1
DEG_SPOP_SBC_1
603:607
PVTTS
SPOP
0.9995
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_SPOP_SBC_1
1396:1400
PVTTS
SPOP
0.9951
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
278:282
PVTTS
SPOP
0.9519
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1661:1665
PVTTS
SPOP
0.9211
More...
Q6ZTI0
Putative uncharacterized protein FLJ44636
DEG_SPOP_SBC_1
9:13
PVTTS
SPOP
0.9393
More...