DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PVTTS
Uniprot ID:
Q96JN0
Source protein:
Ligand-dependent corepressor
Source gene:
LCOR
Class:
DEG_SPOP_SBC_1
Location:
38:42
E3 ligase:
SPOP
DEGRON score:
0.9743
ASA_SCORE:
74.52
COIL:
0.8976
CONS_SCORE:
0.4141
DSS_SCORE:
0.6697
HELIX:
0.0402
FCONS_SCORE:
0.8446
RIG_SCORE:
0.6152
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q49E
TCGA-17-Z026
LUAD
TCGA
PVTTS
DEG_SPOP_SBC_1
0.1389
p.P38A
TCGA-44-A47G
LUAD
TCGA
PVTTS
DEG_SPOP_SBC_1
0.6392
p.P38A
DO23681
LUAD
ICGC
PVTTS
DEG_SPOP_SBC_1
0.6392
p.P38S
DO233634
GACA
ICGC
PVTTS
DEG_SPOP_SBC_1
0.6752
p.T44M
SIDM00461
Acute Myeloid Leukemia
GDSC
PVTTS
DEG_SPOP_SBC_1
0.7222
p.T44M
SIDM00217
Colorectal Carcinoma
GDSC
PVTTS
DEG_SPOP_SBC_1
0.7222
p.T44M
ACH-000065
Leukemia
CCLE
PVTTS
DEG_SPOP_SBC_1
0.7222
p.T44M
ACH-000999
Colon/Colorectal Cancer
CCLE
PVTTS
DEG_SPOP_SBC_1
0.7222
p.T44M
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
PVTTS
DEG_SPOP_SBC_1
0.7222
p.T44M
SNU-1040
large_intestine
COSMIC
PVTTS
DEG_SPOP_SBC_1
0.7222
Drug responses associated with LCOR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95405
Zinc finger FYVE domain-containing protein 9
DEG_SPOP_SBC_1
866:870
PVTTS
SPOP
0.9916
More...
P18146
Early growth response protein 1
DEG_SPOP_SBC_1
453:457
PVTTS
SPOP
0.8941
More...
P42858
Huntingtin
DEG_SPOP_SBC_1
1218:1222
PVTTS
SPOP
0.9924
More...
Q01167
Forkhead box protein K2
DEG_SPOP_SBC_1
457:461
PVTTS
SPOP
0.9295
More...
Q15735
Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
DEG_SPOP_SBC_1
396:400
PVTTS
SPOP
0.9907
More...
Q15751
Probable E3 ubiquitin-protein ligase HERC1
DEG_SPOP_SBC_1
2633:2637
PVTTS
SPOP
0.9265
More...
Q2TAL8
Transcriptional regulator QRICH1
DEG_SPOP_SBC_1
79:83
PVTTS
SPOP
0.9415
More...
Q5T5P2
Sickle tail protein homolog
DEG_SPOP_SBC_1
1114:1118
PVTTS
SPOP
0.9913
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
541:545
PVTTS
SPOP
0.876
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
954:958
PVTTS
SPOP
0.9503
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1131:1135
PVTTS
SPOP
0.8176
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1367:1371
PVTTS
SPOP
0.5669
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
1720:1724
PVTTS
SPOP
0.7511
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2250:2254
PVTTS
SPOP
0.7066
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2722:2726
PVTTS
SPOP
0.9789
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2781:2785
PVTTS
SPOP
0.7773
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2840:2844
PVTTS
SPOP
0.6573
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3135:3139
PVTTS
SPOP
0.7818
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3194:3198
PVTTS
SPOP
0.8497
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3370:3374
PVTTS
SPOP
0.9693
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3724:3728
PVTTS
SPOP
0.7788
More...
Q7Z7B0
Filamin-A-interacting protein 1
DEG_SPOP_SBC_1
1133:1137
PVTTS
SPOP
0.9971
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8904:8908
PVTTS
SPOP
0.8117
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10028:10032
PVTTS
SPOP
0.5276
More...
Q96JN0
Ligand-dependent corepressor
DEG_SPOP_SBC_1
38:42
PVTTS
SPOP
0.9743
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
346:350
PVTTS
SPOP
0.5472
More...
Q9HBL0
Tensin-1
DEG_SPOP_SBC_1
603:607
PVTTS
SPOP
0.9995
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_SPOP_SBC_1
1396:1400
PVTTS
SPOP
0.9951
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
278:282
PVTTS
SPOP
0.9519
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1661:1665
PVTTS
SPOP
0.9211
More...
Q6ZTI0
Putative uncharacterized protein FLJ44636
DEG_SPOP_SBC_1
9:13
PVTTS
SPOP
0.9393
More...