DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VASST
Uniprot ID:
O94876
Source protein:
Transmembrane and coiled-coil domains protein 1
Source gene:
TMCC1
Class:
DEG_SPOP_SBC_1
Location:
208:212
E3 ligase:
SPOP
DEGRON score:
0.6543
ASA_SCORE:
61.96
COIL:
0.7512
CONS_SCORE:
0.3764
DSS_SCORE:
0.5416
HELIX:
0.1588
FCONS_SCORE:
1.0196
RIG_SCORE:
0.6087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q203K
TCGA-EE-A2MG
SKCM
TCGA
VASST
DEG_SPOP_SBC_1
0.1944
p.Q203K
DO37421
SKCM
ICGC
VASST
DEG_SPOP_SBC_1
0.1944
p.A214V
DO233865
GACA
ICGC
VASST
DEG_SPOP_SBC_1
0.2778
p.A214V
DO38867
STAD
ICGC
VASST
DEG_SPOP_SBC_1
0.2778
p.S215N
DO228957
LICA
ICGC
VASST
DEG_SPOP_SBC_1
0.25
p.M209V
DO52193
LIHC
ICGC
VASST
DEG_SPOP_SBC_1
0.7208
p.Q216E
DO26981
LUSC
ICGC
VASST
DEG_SPOP_SBC_1
0.2222
p.Q216E
ACH-001208
Kidney Cancer
CCLE
VASST
DEG_SPOP_SBC_1
0.2222
p.Q216E
TK10
kidney
COSMIC
VASST
DEG_SPOP_SBC_1
0.2222
p.S208I
DO26449
LUSC
ICGC
VASST
DEG_SPOP_SBC_1
0.7341
p.R220Q
DO222532
MELA
ICGC
VASST
DEG_SPOP_SBC_1
0.1111
p.S200N
DO232761
PBCA
ICGC
VASST
DEG_SPOP_SBC_1
0.1111
p.A207T
DO41235
UCEC
ICGC
VASST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with TMCC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VASST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
208:212
VASST
SPOP
0.6543
More...
P10071
Transcriptional activator GLI3
DEG_SPOP_SBC_1
34:38
VASST
SPOP
0.9984
More...
P22670
MHC class II regulatory factor RFX1
DEG_SPOP_SBC_1
366:370
VASST
SPOP
0.601
More...
P35789
Zinc finger protein 93
DEG_SPOP_SBC_1
435:439
VASST
SPOP
0.6657
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
444:448
VASST
SPOP
0.937
More...
Q14008
Cytoskeleton-associated protein 5
DEG_SPOP_SBC_1
1971:1975
VASST
SPOP
0.9917
More...
Q7RTP6
[F-actin]-monooxygenase MICAL3
DEG_SPOP_SBC_1
860:864
VASST
SPOP
0.9989
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
110:114
VASST
SPOP
0.9912
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
862:866
VASST
SPOP
0.9864
More...
Q9H4H8
Protein FAM83D
DEG_SPOP_SBC_1
487:491
VASST
SPOP
0.9868
More...
Q9UHD8
Septin-9
DEG_SPOP_SBC_1
56:60
VASST
SPOP
0.9944
More...
Q9UI36
Dachshund homolog 1
DEG_SPOP_SBC_1
128:132
VASST
SPOP
0.9985
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
2007:2011
VASST
SPOP
0.9246
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SPOP_SBC_1
1380:1384
VASST
SPOP
0.9098
More...
Q8NCQ7
Protein PROCA1
DEG_SPOP_SBC_1
46:50
VASST
SPOP
0.8048
More...