DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VASST
Uniprot ID:
Q9H2X6
Source protein:
Homeodomain-interacting protein kinase 2
Source gene:
HIPK2
Class:
DEG_SPOP_SBC_1
Location:
862:866
E3 ligase:
SPOP
DEGRON score:
0.9864
ASA_SCORE:
75.82
COIL:
0.8144
CONS_SCORE:
0.3222
DSS_SCORE:
0.4749
HELIX:
0.0804
FCONS_SCORE:
0.9454
RIG_SCORE:
0.7518
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R870W
TCGA-AX-A3FT
UCEC
TCGA
VASST
DEG_SPOP_SBC_1
0.2222
p.R870W
DO40801
UCEC
ICGC
VASST
DEG_SPOP_SBC_1
0.2222
p.C857S
TCGA-LG-A9QC
LIHC
TCGA
VASST
DEG_SPOP_SBC_1
0.1944
p.C857S
DO49701
LIHC
ICGC
VASST
DEG_SPOP_SBC_1
0.1944
p.D861H
DO45037
LINC
ICGC
VASST
DEG_SPOP_SBC_1
0.3056
p.D861N
DO46360
OV
ICGC
VASST
DEG_SPOP_SBC_1
0.3056
p.T866A
DO229446
SKCA
ICGC
VASST
DEG_SPOP_SBC_1
0.7139
p.R868W
SIDM00351
Oral Cavity Carcinoma
GDSC
VASST
DEG_SPOP_SBC_1
0.2778
p.R868W
SIDM01782
Oral Cavity Carcinoma
GDSC
VASST
DEG_SPOP_SBC_1
0.2778
p.R868W
SAS
upper_aerodigestive_tract
COSMIC
VASST
DEG_SPOP_SBC_1
0.2778
p.I875V
SIDM00864
Cervical Carcinoma
GDSC
VASST
DEG_SPOP_SBC_1
0.0833
p.I875V
ACH-001341
Cervical Cancer
CCLE
VASST
DEG_SPOP_SBC_1
0.0833
p.I875V
DoTc2-4510
cervix
COSMIC
VASST
DEG_SPOP_SBC_1
0.0833
p.V862M
ACH-001518
Endometrial/Uterine Cancer
CCLE
VASST
DEG_SPOP_SBC_1
0.7208
p.E869K
SNU-1040
large_intestine
COSMIC
VASST
DEG_SPOP_SBC_1
0.25
Drug responses associated with HIPK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00926
UNCLASSIFIED|lung_NSCLC_not_specified
p.E136D (No)
GDSC
PI-103
186.6479
SIDM00951
LAML|acute_myeloid_leukaemia
p.D502N (No)
GDSC
PI-103
1.081
SIDM00951
LAML|acute_myeloid_leukaemia
p.I227T (No)
GDSC
PI-103
1.081
SIDM00939
UNCLASSIFIED|lung_NSCLC_not_specified
p.G1184V (No)
GDSC
PI-103
0.1231
SIDM00680
COREAD|large_intestine
p.R554Q (No)
GDSC
PI-103
131.335
SIDM01045
UCEC|endometrium
p.L59fs*56 (No)
GDSC
PI-103
3.7811
SIDM00499
PRAD|prostate
p.G45D (No)
GDSC
PI-103
0.3537
SIDM00145
ALL|lymphoblastic_leukemia
p.N914K (No)
GDSC
PI-103
0.1685
SIDM00108
SKCM|melanoma
p.H322Q (No)
GDSC
PI-103
2.1752
SIDM00351
HNSC|head_and_neck
p.R868W (Yes)
GDSC
PI-103
1.0036
SIDM00976
SKCM|melanoma
p.G348R (No)
GDSC
PI-103
0.2229
SIDM00045
STAD|stomach
p.C658F (No)
GDSC
PI-103
0.7557
SIDM01107
SKCM|melanoma
p.T602P (No)
GDSC
PI-103
57.4273
SIDM01007
ALL|lymphoblastic_leukemia
p.H807R (No)
GDSC
PI-103
0.2023
SIDM01007
ALL|lymphoblastic_leukemia
p.K805R (No)
GDSC
PI-103
0.2023
SIDM01073
UNCLASSIFIED|hairy_cell_leukaemia
p.S142N (No)
GDSC
PI-103
0.2031
SIDM00742
LUAD|lung_NSCLC_adenocarcinoma
p.H760R (No)
GDSC
PI-103
2.0651
SIDM00565
HNSC|head_and_neck
p.V737M (No)
GDSC
PI-103
2.2952
SIDM00443
DLBC|B_cell_lymphoma
p.R941C (No)
GDSC
PI-103
0.0219
SIDM00377
UNCLASSIFIED|uterus
p.H540R (No)
GDSC
PI-103
2.6284
SIDM00498
COREAD|large_intestine
p.I603V (No)
GDSC
PI-103
3.2887
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.A624V (No)
GDSC
PI-103
0.0783
SIDM01045
UCEC|endometrium
p.V94E (No)
GDSC
PI-103
3.7811
SIDM00946
ALL|T_cell_leukemia
p.V50M (No)
GDSC
PI-103
0.526
SIDM00864
CESC|cervix
p.I875V (Yes)
GDSC
PI-103
23.1182
SIDM00523
SCLC|lung_small_cell_carcinoma
p.R433S (No)
GDSC
PI-103
131.0205
SIDM00217
COREAD|large_intestine
p.A1178V (No)
GDSC
PI-103
1.8634
SIDM00217
COREAD|large_intestine
p.E896K (No)
GDSC
PI-103
1.8634
SIDM01003
ALL|lymphoblastic_leukemia
p.R497Q (No)
GDSC
PI-103
0.2158
SIDM00216
COREAD|large_intestine
p.I146T (No)
GDSC
PI-103
20.9452
SIDM00596
UCEC|endometrium
p.R498Q (No)
GDSC
PI-103
22.6646
SIDM00282
COREAD|large_intestine
p.A719S (No)
GDSC
PI-103
28.6572
SIDM00660
COREAD|large_intestine
p.A512V (No)
GDSC
PI-103
0.5852
SIDM00955
SKCM|melanoma
p.T1022N (No)
GDSC
PI-103
14.8056
SIDM00783
COREAD|large_intestine
p.R792W (No)
GDSC
PI-103
0.5867
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.I33V (No)
GDSC
PI-103
0.0974
SIDM00789
COREAD|large_intestine
p.V67I (No)
GDSC
PI-103
0.8427
SIDM00534
COREAD|large_intestine
p.V1121A (No)
GDSC
PI-103
137.3337
SIDM00149
SKCM|melanoma
p.M635I (No)
GDSC
PI-103
3.9173
SIDM00545
SKCM|melanoma
p.R1056Q (No)
GDSC
PI-103
9.7833
SIDM00545
SKCM|melanoma
p.H524Y (No)
GDSC
PI-103
9.7833
SIDM00114
MESO|mesothelioma
p.L716I (No)
GDSC
PI-103
6.8017
SIDM01154
ALL|lymphoblastic_T_cell_leukaemia
p.R133H (No)
GDSC
PI-103
0.976
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.L108F (No)
GDSC
PI-103
0.2536
SIDM00339
LUAD|lung_NSCLC_adenocarcinoma
p.S317I (No)
GDSC
PI-103
17.6642
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.F500V (No)
GDSC
PI-103
1.0649
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.Y468N (No)
GDSC
PI-103
1.0649
SIDM00537
COREAD|large_intestine
p.T125A (No)
GDSC
PI-103
32.6383
SIDM00799
GBM|glioma
p.S1002Y (No)
GDSC
PI-103
54.1746
SIDM00496
THCA|thyroid
p.Q747K (No)
GDSC
PI-103
0.4742
SIDM00878
BRCA|breast
p.R833C (No)
GDSC
PI-103
0.1835
All proteins holding degron of VASST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
208:212
VASST
SPOP
0.6543
More...
P10071
Transcriptional activator GLI3
DEG_SPOP_SBC_1
34:38
VASST
SPOP
0.9984
More...
P22670
MHC class II regulatory factor RFX1
DEG_SPOP_SBC_1
366:370
VASST
SPOP
0.601
More...
P35789
Zinc finger protein 93
DEG_SPOP_SBC_1
435:439
VASST
SPOP
0.6657
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
444:448
VASST
SPOP
0.937
More...
Q14008
Cytoskeleton-associated protein 5
DEG_SPOP_SBC_1
1971:1975
VASST
SPOP
0.9917
More...
Q7RTP6
[F-actin]-monooxygenase MICAL3
DEG_SPOP_SBC_1
860:864
VASST
SPOP
0.9989
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
110:114
VASST
SPOP
0.9912
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
862:866
VASST
SPOP
0.9864
More...
Q9H4H8
Protein FAM83D
DEG_SPOP_SBC_1
487:491
VASST
SPOP
0.9868
More...
Q9UHD8
Septin-9
DEG_SPOP_SBC_1
56:60
VASST
SPOP
0.9944
More...
Q9UI36
Dachshund homolog 1
DEG_SPOP_SBC_1
128:132
VASST
SPOP
0.9985
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
2007:2011
VASST
SPOP
0.9246
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SPOP_SBC_1
1380:1384
VASST
SPOP
0.9098
More...
Q8NCQ7
Protein PROCA1
DEG_SPOP_SBC_1
46:50
VASST
SPOP
0.8048
More...