DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VASST
Uniprot ID:
Q14008
Source protein:
Cytoskeleton-associated protein 5
Source gene:
CKAP5
Class:
DEG_SPOP_SBC_1
Location:
1971:1975
E3 ligase:
SPOP
DEGRON score:
0.9917
ASA_SCORE:
78.86
COIL:
0.8188
CONS_SCORE:
0.2152
DSS_SCORE:
0.5662
HELIX:
0.1568
FCONS_SCORE:
0.8723
RIG_SCORE:
0.6613
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1974F
TCGA-90-A4ED
LUSC
TCGA
VASST
DEG_SPOP_SBC_1
0.7982
p.T1975I
TCGA-CK-4951
COAD
TCGA
VASST
DEG_SPOP_SBC_1
0.7078
p.S1973Y
TCGA-CK-4951
COAD
TCGA
VASST
DEG_SPOP_SBC_1
0.712
p.R1971C
DO43755
UCEC
ICGC
VASST
DEG_SPOP_SBC_1
0.8301
p.R1971C
HT-115
large_intestine
COSMIC
VASST
DEG_SPOP_SBC_1
0.8301
Drug responses associated with CKAP5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VASST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
208:212
VASST
SPOP
0.6543
More...
P10071
Transcriptional activator GLI3
DEG_SPOP_SBC_1
34:38
VASST
SPOP
0.9984
More...
P22670
MHC class II regulatory factor RFX1
DEG_SPOP_SBC_1
366:370
VASST
SPOP
0.601
More...
P35789
Zinc finger protein 93
DEG_SPOP_SBC_1
435:439
VASST
SPOP
0.6657
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
444:448
VASST
SPOP
0.937
More...
Q14008
Cytoskeleton-associated protein 5
DEG_SPOP_SBC_1
1971:1975
VASST
SPOP
0.9917
More...
Q7RTP6
[F-actin]-monooxygenase MICAL3
DEG_SPOP_SBC_1
860:864
VASST
SPOP
0.9989
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
110:114
VASST
SPOP
0.9912
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
862:866
VASST
SPOP
0.9864
More...
Q9H4H8
Protein FAM83D
DEG_SPOP_SBC_1
487:491
VASST
SPOP
0.9868
More...
Q9UHD8
Septin-9
DEG_SPOP_SBC_1
56:60
VASST
SPOP
0.9944
More...
Q9UI36
Dachshund homolog 1
DEG_SPOP_SBC_1
128:132
VASST
SPOP
0.9985
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
2007:2011
VASST
SPOP
0.9246
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SPOP_SBC_1
1380:1384
VASST
SPOP
0.9098
More...
Q8NCQ7
Protein PROCA1
DEG_SPOP_SBC_1
46:50
VASST
SPOP
0.8048
More...