DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VASST
Uniprot ID:
Q9H4H8
Source protein:
Protein FAM83D
Source gene:
FAM83D
Class:
DEG_SPOP_SBC_1
Location:
487:491
E3 ligase:
SPOP
DEGRON score:
0.9868
ASA_SCORE:
90.7
COIL:
0.9564
CONS_SCORE:
0.4658
DSS_SCORE:
0.5175
HELIX:
0.0214
FCONS_SCORE:
0.9375
RIG_SCORE:
0.5545
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P483H
TCGA-17-Z025
LUAD
TCGA
VASST
DEG_SPOP_SBC_1
0.2222
p.T489A
TCGA-66-2783
LUSC
TCGA
VASST
DEG_SPOP_SBC_1
0.7139
p.T489A
DO26452
LUSC
ICGC
VASST
DEG_SPOP_SBC_1
0.7139
p.V499I
TCGA-AA-A010
COAD
TCGA
VASST
DEG_SPOP_SBC_1
0.1111
p.S488P
TCGA-AX-A3FV
UCEC
TCGA
VASST
DEG_SPOP_SBC_1
0.6752
p.S488P
DO219767
UCEC
ICGC
VASST
DEG_SPOP_SBC_1
0.6752
p.G491W
TCGA-ER-A2NH
SKCM
TCGA
VASST
DEG_SPOP_SBC_1
0.7825
p.G491W
DO47683
SKCM
ICGC
VASST
DEG_SPOP_SBC_1
0.7825
p.G485E
TCGA-IB-7651
PAAD
TCGA
VASST
DEG_SPOP_SBC_1
0.2778
p.G485E
DO46657
PAAD
ICGC
VASST
DEG_SPOP_SBC_1
0.2778
p.V494F
DO231690
LINC
ICGC
VASST
DEG_SPOP_SBC_1
0.25
p.R484Q
DO222396
MELA
ICGC
VASST
DEG_SPOP_SBC_1
0.25
p.V487A
SIDM00145
T-Lymphoblastic Leukemia
GDSC
VASST
DEG_SPOP_SBC_1
0.5825
p.V487A
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
VASST
DEG_SPOP_SBC_1
0.5825
Drug responses associated with FAM83D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VASST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
208:212
VASST
SPOP
0.6543
More...
P10071
Transcriptional activator GLI3
DEG_SPOP_SBC_1
34:38
VASST
SPOP
0.9984
More...
P22670
MHC class II regulatory factor RFX1
DEG_SPOP_SBC_1
366:370
VASST
SPOP
0.601
More...
P35789
Zinc finger protein 93
DEG_SPOP_SBC_1
435:439
VASST
SPOP
0.6657
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
444:448
VASST
SPOP
0.937
More...
Q14008
Cytoskeleton-associated protein 5
DEG_SPOP_SBC_1
1971:1975
VASST
SPOP
0.9917
More...
Q7RTP6
[F-actin]-monooxygenase MICAL3
DEG_SPOP_SBC_1
860:864
VASST
SPOP
0.9989
More...
Q96F05
Uncharacterized protein C11orf24
DEG_SPOP_SBC_1
110:114
VASST
SPOP
0.9912
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
862:866
VASST
SPOP
0.9864
More...
Q9H4H8
Protein FAM83D
DEG_SPOP_SBC_1
487:491
VASST
SPOP
0.9868
More...
Q9UHD8
Septin-9
DEG_SPOP_SBC_1
56:60
VASST
SPOP
0.9944
More...
Q9UI36
Dachshund homolog 1
DEG_SPOP_SBC_1
128:132
VASST
SPOP
0.9985
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
2007:2011
VASST
SPOP
0.9246
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SPOP_SBC_1
1380:1384
VASST
SPOP
0.9098
More...
Q8NCQ7
Protein PROCA1
DEG_SPOP_SBC_1
46:50
VASST
SPOP
0.8048
More...