DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VPSST
Uniprot ID:
O43451
Source protein:
Maltase-glucoamylase
Source gene:
MGAM
Class:
DEG_SPOP_SBC_1
Location:
1969:1973
E3 ligase:
SPOP
DEGRON score:
0.5297
ASA_SCORE:
71.04
COIL:
0.924
CONS_SCORE:
0
DSS_SCORE:
0.3615
HELIX:
0.0174
FCONS_SCORE:
0
RIG_SCORE:
0.6498
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1959D
DO52597
BOCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.0556
p.S1971F
DO5249
BRCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.7982
p.V1962I
DO230334
COCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.1389
p.V1962I
DO229013
COCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.1389
p.V1962I
DO229016
COCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.1389
p.V1962I
DO52365
LUSC
ICGC
VPSST
DEG_SPOP_SBC_1
0.1389
p.L1978R
DO234233
ESAD
ICGC
VPSST
DEG_SPOP_SBC_1
0.1944
p.V1969M
DO233941
GACA
ICGC
VPSST
DEG_SPOP_SBC_1
0.7208
p.D1980N
DO222363
MELA
ICGC
VPSST
DEG_SPOP_SBC_1
0.1389
p.G1976S
DO222546
MELA
ICGC
VPSST
DEG_SPOP_SBC_1
0.25
p.P1967T
DO46611
OV
ICGC
VPSST
DEG_SPOP_SBC_1
0.2778
p.S1972N
ACH-001522
Skin Cancer
CCLE
VPSST
DEG_SPOP_SBC_1
0.7069
p.I1983V
JURL-MK1
haematopoietic_and_lymphoid_tissue
COSMIC
VPSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with MGAM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43451
Maltase-glucoamylase
DEG_SPOP_SBC_1
1969:1973
VPSST
SPOP
0.5297
More...
O75509
Tumor necrosis factor receptor superfamily member 21
DEG_SPOP_SBC_1
241:245
VPSST
SPOP
0.9727
More...
P15941
Mucin-1
DEG_SPOP_SBC_1
45:49
VPSST
SPOP
0.9082
More...
P19438
Tumor necrosis factor receptor superfamily member 1A
DEG_SPOP_SBC_1
288:292
VPSST
SPOP
0.9514
More...
Q9H1K0
Rabenosyn-5
DEG_SPOP_SBC_1
580:584
VPSST
SPOP
0.9962
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
156:160
VPSST
SPOP
0.8129
More...
Q9H4W6
Transcription factor COE3
DEG_SPOP_SBC_1
473:477
VPSST
SPOP
0.9884
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
553:557
VPSST
SPOP
0.9515
More...
Q9NYB9
Abl interactor 2
DEG_SPOP_SBC_1
310:314
VPSST
SPOP
0.9925
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
1773:1777
VPSST
SPOP
0.9973
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
643:647
VPSST
SPOP
0.9721
More...
Q9NRJ5
Poly
DEG_SPOP_SBC_1
536:540
VPSST
SPOP
0.998
More...
Q6ZNC4
Zinc finger protein 704
DEG_SPOP_SBC_1
121:125
VPSST
SPOP
0.9625
More...
Q96LR7
Uncharacterized protein C2orf50
DEG_SPOP_SBC_1
119:123
VPSST
SPOP
0.8932
More...