DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPSST
Uniprot ID:
Q9H4A3
Source protein:
Serine/threonine-protein kinase WNK1
Source gene:
WNK1
Class:
DEG_SPOP_SBC_1
Location:
156:160
E3 ligase:
SPOP
DEGRON score:
0.8129
ASA_SCORE:
86.84
COIL:
0.9262
CONS_SCORE:
0.3062
DSS_SCORE:
0.7396
HELIX:
0.0328
FCONS_SCORE:
0.9484
RIG_SCORE:
0.5474
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T160N
TCGA-78-8640
LUAD
TCGA
VPSST
DEG_SPOP_SBC_1
0.7055
p.T160N
DO45340
LUAD
ICGC
VPSST
DEG_SPOP_SBC_1
0.7055
p.I151M
DO474
BLCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.1944
p.A152T
DO222874
COCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.2222
p.A148S
DO27302
LUSC
ICGC
VPSST
DEG_SPOP_SBC_1
0.1111
p.S154W
DO228498
PRAD
ICGC
VPSST
DEG_SPOP_SBC_1
0.2778
p.R159W
DO38404
STAD
ICGC
VPSST
DEG_SPOP_SBC_1
0.8634
p.A152V
DO219773
UCEC
ICGC
VPSST
DEG_SPOP_SBC_1
0.2222
p.Y150C
DO42825
UCEC
ICGC
VPSST
DEG_SPOP_SBC_1
0.1667
p.A149V
SIDM00611
Kidney Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01219
Non-Small Cell Lung Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM00157
Neuroblastoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM00362
Burkitt's Lymphoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM00240
Cervical Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM00192
Colorectal Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01682
Gastric Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01377
Ovarian Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01469
Pancreatic Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01767
Squamous Cell Lung Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01316
Ewing's Sarcoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM00164
Biliary Tract Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM00500
Colorectal Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.A149V
SIDM01391
Neuroblastoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1389
p.P153L
ACH-001419
Breast Cancer
CCLE
VPSST
DEG_SPOP_SBC_1
0.25
p.G153E
REH
haematopoietic_and_lymphoid_tissue
COSMIC
VPSST
DEG_SPOP_SBC_1
0.25
Drug responses associated with WNK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43451
Maltase-glucoamylase
DEG_SPOP_SBC_1
1969:1973
VPSST
SPOP
0.5297
More...
O75509
Tumor necrosis factor receptor superfamily member 21
DEG_SPOP_SBC_1
241:245
VPSST
SPOP
0.9727
More...
P15941
Mucin-1
DEG_SPOP_SBC_1
45:49
VPSST
SPOP
0.9082
More...
P19438
Tumor necrosis factor receptor superfamily member 1A
DEG_SPOP_SBC_1
288:292
VPSST
SPOP
0.9514
More...
Q9H1K0
Rabenosyn-5
DEG_SPOP_SBC_1
580:584
VPSST
SPOP
0.9962
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
156:160
VPSST
SPOP
0.8129
More...
Q9H4W6
Transcription factor COE3
DEG_SPOP_SBC_1
473:477
VPSST
SPOP
0.9884
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
553:557
VPSST
SPOP
0.9515
More...
Q9NYB9
Abl interactor 2
DEG_SPOP_SBC_1
310:314
VPSST
SPOP
0.9925
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
1773:1777
VPSST
SPOP
0.9973
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
643:647
VPSST
SPOP
0.9721
More...
Q9NRJ5
Poly
DEG_SPOP_SBC_1
536:540
VPSST
SPOP
0.998
More...
Q6ZNC4
Zinc finger protein 704
DEG_SPOP_SBC_1
121:125
VPSST
SPOP
0.9625
More...
Q96LR7
Uncharacterized protein C2orf50
DEG_SPOP_SBC_1
119:123
VPSST
SPOP
0.8932
More...