DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPSST
Uniprot ID:
Q9NYB9
Source protein:
Abl interactor 2
Source gene:
ABI2
Class:
DEG_SPOP_SBC_1
Location:
310:314
E3 ligase:
SPOP
DEGRON score:
0.9925
ASA_SCORE:
79.04
COIL:
0.9484
CONS_SCORE:
0.2978
DSS_SCORE:
0.5032
HELIX:
0.026
FCONS_SCORE:
1.0691
RIG_SCORE:
0.6442
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P324H
TCGA-06-5416
GBM
TCGA
VPSST
DEG_SPOP_SBC_1
0.0556
p.P308H
TCGA-A3-3387
KIRC
TCGA
VPSST
DEG_SPOP_SBC_1
0.2778
p.S301T
TCGA-HU-8602
STAD
TCGA
VPSST
DEG_SPOP_SBC_1
0.0833
p.P315S
DO225337
BRCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.3056
p.T306A
DO227987
COCA
ICGC
VPSST
DEG_SPOP_SBC_1
0.2222
p.T309I
DO233911
GACA
ICGC
VPSST
DEG_SPOP_SBC_1
0.3056
p.I310L
DO231851
LINC
ICGC
VPSST
DEG_SPOP_SBC_1
0.7174
p.S313T
DO47829
STAD
ICGC
VPSST
DEG_SPOP_SBC_1
0.6005
p.P302H
SIDM00783
Colorectal Carcinoma
GDSC
VPSST
DEG_SPOP_SBC_1
0.1111
p.P302H
ACH-000971
Colon/Colorectal Cancer
CCLE
VPSST
DEG_SPOP_SBC_1
0.1111
p.P302H
HCT-116
large_intestine
COSMIC
VPSST
DEG_SPOP_SBC_1
0.1111
p.P314L
ACH-000938
Leukemia
CCLE
VPSST
DEG_SPOP_SBC_1
0.7582
p.P314L
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
VPSST
DEG_SPOP_SBC_1
0.7582
p.A315V
ACH-000982
Colon/Colorectal Cancer
CCLE
VPSST
DEG_SPOP_SBC_1
0.3056
p.P302T
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
VPSST
DEG_SPOP_SBC_1
0.1111
p.D322Y
CAMA-1
breast
COSMIC
VPSST
DEG_SPOP_SBC_1
0.1111
p.L316H
SF295
central_nervous_system
COSMIC
VPSST
DEG_SPOP_SBC_1
0.2778
p.P323L
HPAC
pancreas
COSMIC
VPSST
DEG_SPOP_SBC_1
0.0833
p.T309A
MEL-JUSO
skin
COSMIC
VPSST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with ABI2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43451
Maltase-glucoamylase
DEG_SPOP_SBC_1
1969:1973
VPSST
SPOP
0.5297
More...
O75509
Tumor necrosis factor receptor superfamily member 21
DEG_SPOP_SBC_1
241:245
VPSST
SPOP
0.9727
More...
P15941
Mucin-1
DEG_SPOP_SBC_1
45:49
VPSST
SPOP
0.9082
More...
P19438
Tumor necrosis factor receptor superfamily member 1A
DEG_SPOP_SBC_1
288:292
VPSST
SPOP
0.9514
More...
Q9H1K0
Rabenosyn-5
DEG_SPOP_SBC_1
580:584
VPSST
SPOP
0.9962
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
156:160
VPSST
SPOP
0.8129
More...
Q9H4W6
Transcription factor COE3
DEG_SPOP_SBC_1
473:477
VPSST
SPOP
0.9884
More...
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SPOP_SBC_1
553:557
VPSST
SPOP
0.9515
More...
Q9NYB9
Abl interactor 2
DEG_SPOP_SBC_1
310:314
VPSST
SPOP
0.9925
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
1773:1777
VPSST
SPOP
0.9973
More...
Q5T8P6
RNA-binding protein 26
DEG_SPOP_SBC_1
643:647
VPSST
SPOP
0.9721
More...
Q9NRJ5
Poly
DEG_SPOP_SBC_1
536:540
VPSST
SPOP
0.998
More...
Q6ZNC4
Zinc finger protein 704
DEG_SPOP_SBC_1
121:125
VPSST
SPOP
0.9625
More...
Q96LR7
Uncharacterized protein C2orf50
DEG_SPOP_SBC_1
119:123
VPSST
SPOP
0.8932
More...