DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APSTT
Uniprot ID:
O15389
Source protein:
Sialic acid-binding Ig-like lectin 5
Source gene:
SIGLEC5
Class:
DEG_SPOP_SBC_1
Location:
538:542
E3 ligase:
SPOP
DEGRON score:
0.9802
ASA_SCORE:
82.54
COIL:
0.8496
CONS_SCORE:
0.6029
DSS_SCORE:
0.6849
HELIX:
0.0412
FCONS_SCORE:
1.0318
RIG_SCORE:
0.6288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S540R
TCGA-50-5931
LUAD
TCGA
APSTT
DEG_SPOP_SBC_1
0.7427
p.S540R
DO229028
LICA
ICGC
APSTT
DEG_SPOP_SBC_1
0.7427
p.S540R
DO24980
LUAD
ICGC
APSTT
DEG_SPOP_SBC_1
0.7427
p.D535G
TCGA-AA-A010
COAD
TCGA
APSTT
DEG_SPOP_SBC_1
0.25
p.S530L
TCGA-AJ-A3EL
UCEC
TCGA
APSTT
DEG_SPOP_SBC_1
0.1111
p.S530L
DO41542
UCEC
ICGC
APSTT
DEG_SPOP_SBC_1
0.1111
p.S545L
TCGA-CV-6936
HNSC
TCGA
APSTT
DEG_SPOP_SBC_1
0.6944
p.S545L
DO14210
HNSC
ICGC
APSTT
DEG_SPOP_SBC_1
0.6944
p.K548N
TCGA-D8-A27F
BRCA
TCGA
APSTT
DEG_SPOP_SBC_1
0.2778
p.K548N
DO1274
BRCA
ICGC
APSTT
DEG_SPOP_SBC_1
0.2778
p.K529T
DO218031
GACA
ICGC
APSTT
DEG_SPOP_SBC_1
0.1944
p.K529T
DO218243
GACA
ICGC
APSTT
DEG_SPOP_SBC_1
0.1944
p.A538D
DO229045
LICA
ICGC
APSTT
DEG_SPOP_SBC_1
0.7793
p.Y544C
DO231784
LINC
ICGC
APSTT
DEG_SPOP_SBC_1
0.7222
p.T549K
DO232009
ORCA
ICGC
APSTT
DEG_SPOP_SBC_1
0.1389
p.A538T
DO228138
PBCA
ICGC
APSTT
DEG_SPOP_SBC_1
0.7139
p.E537D
DO229275
THCA
ICGC
APSTT
DEG_SPOP_SBC_1
0.3056
p.P533H
DO229275
THCA
ICGC
APSTT
DEG_SPOP_SBC_1
0.1944
p.E532K
SIDM00545
Melanoma
GDSC
APSTT
DEG_SPOP_SBC_1
0.1667
p.E532K
SIDM00887
Other Solid Cancers
GDSC
APSTT
DEG_SPOP_SBC_1
0.1667
p.E532K
ACH-000211
Brain Cancer
CCLE
APSTT
DEG_SPOP_SBC_1
0.1667
p.E532K
ACH-000987
Skin Cancer
CCLE
APSTT
DEG_SPOP_SBC_1
0.1667
p.E532K
Daoy
central_nervous_system
COSMIC
APSTT
DEG_SPOP_SBC_1
0.1667
p.E532K
Mewo
skin
COSMIC
APSTT
DEG_SPOP_SBC_1
0.1667
p.I547T
SIDM01483
Melanoma
GDSC
APSTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with SIGLEC5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15226
NF-kappa-B-repressing factor
DEG_SPOP_SBC_1
140:144
APSTT
SPOP
0.8845
More...
O15389
Sialic acid-binding Ig-like lectin 5
DEG_SPOP_SBC_1
538:542
APSTT
SPOP
0.9802
More...
O43150
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
778:782
APSTT
SPOP
0.8384
More...
P49765
Vascular endothelial growth factor B
DEG_SPOP_SBC_1
179:183
APSTT
SPOP
0.9197
More...
Q15714
TSC22 domain family protein 1
DEG_SPOP_SBC_1
295:299
APSTT
SPOP
0.9983
More...
Q5SW79
Centrosomal protein of 170 kDa
DEG_SPOP_SBC_1
1332:1336
APSTT
SPOP
0.9016
More...
Q6P1N0
Coiled-coil and C2 domain-containing protein 1A
DEG_SPOP_SBC_1
335:339
APSTT
SPOP
0.9552
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6958:6962
APSTT
SPOP
0.9902
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7577:7581
APSTT
SPOP
0.9928
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
3488:3492
APSTT
SPOP
0.8928
More...
Q96L14
Cep170-like protein
DEG_SPOP_SBC_1
58:62
APSTT
SPOP
0.9773
More...
Q96M61
Melanoma-associated antigen B18
DEG_SPOP_SBC_1
67:71
APSTT
SPOP
0.9788
More...
Q96RL6
Sialic acid-binding Ig-like lectin 11
DEG_SPOP_SBC_1
662:666
APSTT
SPOP
0.9984
More...
Q9BYB0
SH3 and multiple ankyrin repeat domains protein 3
DEG_SPOP_SBC_1
684:688
APSTT
SPOP
0.9971
More...
Q9H4A9
Dipeptidase 2
DEG_SPOP_SBC_1
59:63
APSTT
SPOP
0.9878
More...
Q9NRR4
Ribonuclease 3
DEG_SPOP_SBC_1
58:62
APSTT
SPOP
0.9364
More...
Q9NRR5
Ubiquilin-4
DEG_SPOP_SBC_1
107:111
APSTT
SPOP
0.9984
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
4594:4598
APSTT
SPOP
0.8747
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
263:267
APSTT
SPOP
0.5944
More...
Q6ZS72
Protein PEAK3
DEG_SPOP_SBC_1
364:368
APSTT
SPOP
0.9503
More...
Q8WUT4
Leucine-rich repeat neuronal protein 4
DEG_SPOP_SBC_1
430:434
APSTT
SPOP
0.9498
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
421:425
APSTT
SPOP
0.9451
More...
Q96FV0
Leucine-rich repeat-containing protein 46
DEG_SPOP_SBC_1
308:312
APSTT
SPOP
0.9867
More...