DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PVTST
Uniprot ID:
O75553
Source protein:
Disabled homolog 1
Source gene:
DAB1
Class:
DEG_SPOP_SBC_1
Location:
504:508
E3 ligase:
SPOP
DEGRON score:
0.9801
ASA_SCORE:
95.66
COIL:
0.9658
CONS_SCORE:
0.4907
DSS_SCORE:
0.6238
HELIX:
0.011
FCONS_SCORE:
0.9385
RIG_SCORE:
0.6693
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D507Y
TCGA-29-1770
OV
TCGA
PVTST
DEG_SPOP_SBC_1
0.7325
p.E511D
TCGA-AA-3663
COAD
TCGA
PVTST
DEG_SPOP_SBC_1
0.25
p.E514Q
TCGA-AG-4008
READ
TCGA
PVTST
DEG_SPOP_SBC_1
0.1667
p.S498F
TCGA-AP-A1DV
UCEC
TCGA
PVTST
DEG_SPOP_SBC_1
0.1667
p.S498F
SK-MEL-2
skin
COSMIC
PVTST
DEG_SPOP_SBC_1
0.1667
p.D507N
TCGA-FS-A1ZZ
SKCM
TCGA
PVTST
DEG_SPOP_SBC_1
0.6932
p.S495L
TCGA-GF-A6C9
SKCM
TCGA
PVTST
DEG_SPOP_SBC_1
0.0833
p.E514G
TCGA-SI-A71O
SARC
TCGA
PVTST
DEG_SPOP_SBC_1
0.1667
p.P516L
TCGA-W3-AA1V
SKCM
TCGA
PVTST
DEG_SPOP_SBC_1
0.1111
p.S515C
SIDM02070
Esophageal Carcinoma
GDSC
PVTST
DEG_SPOP_SBC_1
0.1389
p.S515R
SIDM00193
Colorectal Carcinoma
GDSC
PVTST
DEG_SPOP_SBC_1
0.1389
p.S515R
ACH-000991
Colon/Colorectal Cancer
CCLE
PVTST
DEG_SPOP_SBC_1
0.1389
p.S515R
SNU-81
large_intestine
COSMIC
PVTST
DEG_SPOP_SBC_1
0.1389
p.P518T
ACH-000303
Gastric Cancer
CCLE
PVTST
DEG_SPOP_SBC_1
0.0556
p.P518T
NCI-SNU-5
stomach
COSMIC
PVTST
DEG_SPOP_SBC_1
0.0556
p.S513R
SNU-81
large_intestine
COSMIC
PVTST
DEG_SPOP_SBC_1
0.1944
p.E518K
SW684
soft_tissue
COSMIC
PVTST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with DAB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NCS4
Homeobox protein Nkx-2.6
DEG_SPOP_SBC_1
5:9
PVTST
SPOP
0.9836
More...
O75553
Disabled homolog 1
DEG_SPOP_SBC_1
504:508
PVTST
SPOP
0.9801
More...
O75554
WW domain-binding protein 4
DEG_SPOP_SBC_1
96:100
PVTST
SPOP
0.9878
More...
P22736
Nuclear receptor subfamily 4 group A member 1
DEG_SPOP_SBC_1
249:253
PVTST
SPOP
0.9805
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1110:1114
PVTST
SPOP
0.9978
More...
P55197
Protein AF-10
DEG_SPOP_SBC_1
884:888
PVTST
SPOP
0.8239
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2221:2225
PVTST
SPOP
0.7357
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3327:3331
PVTST
SPOP
0.6584
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3625:3629
PVTST
SPOP
0.944
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4058:4062
PVTST
SPOP
0.975
More...
Q13131
5'-AMP-activated protein kinase catalytic subunit alpha-1
DEG_SPOP_SBC_1
450:454
PVTST
SPOP
0.9471
More...
Q6NXT4
Zinc transporter 6
DEG_SPOP_SBC_1
372:376
PVTST
SPOP
0.9593
More...
Q6PL24
Protein TMED8
DEG_SPOP_SBC_1
225:229
PVTST
SPOP
0.9343
More...
Q6UN15
Pre-mRNA 3'-end-processing factor FIP1
DEG_SPOP_SBC_1
203:207
PVTST
SPOP
0.9115
More...
Q7Z7B0
Filamin-A-interacting protein 1
DEG_SPOP_SBC_1
799:803
PVTST
SPOP
0.9685
More...
Q8TAU0
Homeobox protein Nkx-2.3
DEG_SPOP_SBC_1
6:10
PVTST
SPOP
0.9861
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12048:12052
PVTST
SPOP
0.6132
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
43:47
PVTST
SPOP
0.5365
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
1490:1494
PVTST
SPOP
0.9531
More...
Q9P2P6
StAR-related lipid transfer protein 9
DEG_SPOP_SBC_1
4244:4248
PVTST
SPOP
0.8399
More...
Q9UHY1
Nuclear receptor-binding protein
DEG_SPOP_SBC_1
33:37
PVTST
SPOP
0.6542
More...
Q9Y520
Protein PRRC2C
DEG_SPOP_SBC_1
2269:2273
PVTST
SPOP
0.9984
More...
Q5TID7
Coiled-coil domain-containing protein 181
DEG_SPOP_SBC_1
328:332
PVTST
SPOP
0.9574
More...
Q8IXQ8
PDZ domain-containing protein 9
DEG_SPOP_SBC_1
131:135
PVTST
SPOP
0.8501
More...