DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PVTST
Uniprot ID:
Q8IXQ8
Source protein:
PDZ domain-containing protein 9
Source gene:
PDZD9
Class:
DEG_SPOP_SBC_1
Location:
131:135
E3 ligase:
SPOP
DEGRON score:
0.8501
ASA_SCORE:
87.78
COIL:
0.9534
CONS_SCORE:
0.7408
DSS_SCORE:
0.2791
HELIX:
0.0186
FCONS_SCORE:
0.9916
RIG_SCORE:
0.7629
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y129C
SIDM00779
Colorectal Carcinoma
GDSC
PVTST
DEG_SPOP_SBC_1
0.2778
p.Y129C
NCI-H716
large_intestine
COSMIC
PVTST
DEG_SPOP_SBC_1
0.2778
p.G128E
DO234406
ESAD
ICGC
PVTST
DEG_SPOP_SBC_1
0.25
p.G139E
TCGA-OD-A75X
SKCM
TCGA
PVTST
DEG_SPOP_SBC_1
0.2222
p.G139E
DO48601
SKCM
ICGC
PVTST
DEG_SPOP_SBC_1
0.2222
p.H127N
DO229009
LICA
ICGC
PVTST
DEG_SPOP_SBC_1
0.2222
p.D141Y
TCGA-EI-6917
READ
TCGA
PVTST
DEG_SPOP_SBC_1
0.1667
p.D141Y
DO36881
READ
ICGC
PVTST
DEG_SPOP_SBC_1
0.1667
p.D141G
TCGA-XR-A8TG
LIHC
TCGA
PVTST
DEG_SPOP_SBC_1
0.1667
p.D141G
DO223040
ESCA
ICGC
PVTST
DEG_SPOP_SBC_1
0.1667
p.D141G
DO223924
LIHC
ICGC
PVTST
DEG_SPOP_SBC_1
0.1667
p.I122T
TCGA-22-4604
LUSC
TCGA
PVTST
DEG_SPOP_SBC_1
0.0833
p.I122T
DO26922
LUSC
ICGC
PVTST
DEG_SPOP_SBC_1
0.0833
p.S121C
TCGA-L5-A43E
ESCA
TCGA
PVTST
DEG_SPOP_SBC_1
0.0556
Showing 1 to 14 of 14 entries
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Drug responses associated with PDZD9 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PVTST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13131
5'-AMP-activated protein kinase catalytic subunit alpha-1
DEG_SPOP_SBC_1
450:454
PVTST
SPOP
0.9471
More...
Q5TID7
Coiled-coil domain-containing protein 181
DEG_SPOP_SBC_1
328:332
PVTST
SPOP
0.9574
More...
O75553
Disabled homolog 1
DEG_SPOP_SBC_1
504:508
PVTST
SPOP
0.9801
More...
Q7Z7B0
Filamin-A-interacting protein 1
DEG_SPOP_SBC_1
799:803
PVTST
SPOP
0.9685
More...
Q8TAU0
Homeobox protein Nkx-2.3
DEG_SPOP_SBC_1
6:10
PVTST
SPOP
0.9861
More...
A6NCS4
Homeobox protein Nkx-2.6
DEG_SPOP_SBC_1
5:9
PVTST
SPOP
0.9836
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12048:12052
PVTST
SPOP
0.6132
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
43:47
PVTST
SPOP
0.5365
More...
Q99102
Mucin-4
DEG_SPOP_SBC_1
1490:1494
PVTST
SPOP
0.9531
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2221:2225
PVTST
SPOP
0.7357
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3327:3331
PVTST
SPOP
0.6584
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3625:3629
PVTST
SPOP
0.944
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4058:4062
PVTST
SPOP
0.975
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1110:1114
PVTST
SPOP
0.9978
More...
P22736
Nuclear receptor subfamily 4 group A member 1
DEG_SPOP_SBC_1
249:253
PVTST
SPOP
0.9805
More...
Q9UHY1
Nuclear receptor-binding protein
DEG_SPOP_SBC_1
33:37
PVTST
SPOP
0.6542
More...
Q8IXQ8
PDZ domain-containing protein 9
DEG_SPOP_SBC_1
131:135
PVTST
SPOP
0.8501
More...
Q6UN15
Pre-mRNA 3'-end-processing factor FIP1
DEG_SPOP_SBC_1
203:207
PVTST
SPOP
0.9115
More...
P55197
Protein AF-10
DEG_SPOP_SBC_1
884:888
PVTST
SPOP
0.8239
More...
Q9Y520
Protein PRRC2C
DEG_SPOP_SBC_1
2269:2273
PVTST
SPOP
0.9984
More...
Q6PL24
Protein TMED8
DEG_SPOP_SBC_1
225:229
PVTST
SPOP
0.9343
More...
Q9P2P6
StAR-related lipid transfer protein 9
DEG_SPOP_SBC_1
4244:4248
PVTST
SPOP
0.8399
More...
O75554
WW domain-binding protein 4
DEG_SPOP_SBC_1
96:100
PVTST
SPOP
0.9878
More...
Q6NXT4
Zinc transporter 6
DEG_SPOP_SBC_1
372:376
PVTST
SPOP
0.9593
More...
Showing 1 to 24 of 24 entries
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