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Dataset Description
  • Dataset Name: 18405950
  • Species: Rat
  • Method: Microarray
  • No. of Genes: 444
  • Tissue: Nucleus accumbens and amygdala
  • Phenotype: Ethanol self-administration, alcohol-preferring
  • Publication: Rodd et al. Pharmacol Biochem Behav. (2008) Differential gene expression in the nucleus accumbens with ethanol self-administration in inbred alcohol-preferring rats. PubMed
  • Dataset Summary: The current study examined the effects of operant ethanol (EtOH) self-administration on gene expression kin the nucleus accumbens (ACB) and amygdala (AMYG) of inbred alcohol-preferring (iP) rats. Rats self-trained on a standard two-lever operant paradigm to administer either water-water, EtOH (15% v/v)-water, or saccharin (SAC; 0.0125% g/v)-water. For the ACB, there were 513 significant differences at the p < 0.01 level in named genes: 55 between SAC and water; 215 between EtOH and water, and 243 between EtOH and SAC. In the case of the AMYG (p < 0.01), there were 48 between SAC and water, 23 between EtOH and water, and 63 between EtOH and SAC group.

    Gene list of this dataset (444 genes)
    Page: 1 2 3 4 5 6 7 8 9 list all   
    GeneIDSymbolNameGenetic locationOriginal ID1Original ID2
    24245Camk2bcalcium/calmodulin-dependent protein kinase II, beta14q21Camk2b 
    298657Car6carbonic anhydrase 65q36Car6 
    117279CflarCASP8 and FADD-like apoptosis regulator9q31Cflar 
    363425Cav2caveolin 24q21Cav2 
    24252CebpaCCAAT/enhancer binding protein (C/EBP), alpha-Cebpa 
    25621Cd81CD 81 antigen1q41Cd81 
    652929Cd99CD99 antigen-Cd99 
    304951Nuf2NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)13q24Cdca1 
    306748Cxcl14chemokine (C-X-C motif) ligand 1417p14Cxcl14 
    89824Chi3l1chitinase 3-like 113q13Chi3l1 
    84360Clcn3chloride channel 316p12Clcn3 
    192228Ccdc5coiled-coil domain containing 518q12.3Ccdc5 
    363249Ctdsp1CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 19q33Ctdsp1 
    25307Cst3cystatin C3q41Cst3 
    296229P22k15cystatin related protein 23q41P22k15 
    366532Dhx57DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 576q11Dhx57 
    25113Ddndendrin7q36Ddn 
    362431Clec4a3C-type lectin domain family 4, member a34q42Dcir3 
    140666Rcan2regulator of calcineurin 29q12Dscr1l1 
    287447DullardDullard homolog (Xenopus laevis)10q24Dullard 
    362715Dtnbdystrobrevin, beta6q14Dtnb 
    293677Efemp2EGF-containing fibulin-like extracellular matrix protein 21q43Efemp2 
    295490Emcnendomucin2q43Emcn 
    29292Ftl1ferritin light chain 11q22Ftl1 
    361202Gkap1G kinase anchoring protein 117p14Gkap1 
    313843Galmgalactose mutarotase6q11Galm 
    84403Gjb6gap junction membrane channel protein beta 615p12Gjb6 
    24957Glulglutamate-ammonia ligase (glutamine synthetase)13q22Glul 
    60666Gpd1glycerol-3-phosphate dehydrogenase 1 (soluble)7q36Gpd1 
    192179Gpm6bglycoprotein m6bXq21Gpm6b 
    652957Csf2ragranulocyte-macrophage colony stimulating receptor alpha-Csf2ra 
    29384H2afyH2A histone family, member Y17p14H2afy 
    114612Bat1aHLA-B-associated transcript 1A20p12Bat1a 
    29546Homer1homer homolog 1 (Drosophila)2q12Homer1 
    300993Hyal3hyaluronoglucosaminidase 38q32Hyal3 
    291023Id4inhibitor of DNA binding 417p14Id4 
    24511Itgb1integrin beta 1 (fibronectin receptor beta)19q12Itgb1 
    24511Itgb1integrin beta 1 (fibronectin receptor beta)19q12Itgb1 
    305351Klhl5kelch-like 5 (Drosophila)14p11Klhl5 
    363288Kif1akinesin family member 1A9q36Kif1a 
    85497Klf15Kruppel-like factor 154q34Klf15 
    361169Letm2leucine zipper-EF-hand containing transmembrane protein 216q12.4Letm2 
    303369Lig3ligase III, DNA, ATP-dependent10q26Lig3 
    246136Man2c1mannosidase, alpha, class 2C, member 18q24Man2c1 
    311059March7membrane-associated ring finger (C3HC4) 73q21March7 
    29409Magmyelin-associated glycoprotein1q21Mag 
    60430Mcl1myeloid cell leukemia sequence 12q34Mcl1 
    50685Mrlcbmyosin light chain, regulatory B9q38Mrlcb 
    25499Nrd1nardilysin, N-arginine dibasic convertase, NRD convertase 15q35Nrd1 
    309259Ndnl2necdin-like 21q22Ndnl2 
    Page: 1 2 3 4 5 6 7 8 9 list all