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Dataset Description
  • Dataset Name: 18405950
  • Species: Rat
  • Method: Microarray
  • No. of Genes: 444
  • Tissue: Nucleus accumbens and amygdala
  • Phenotype: Ethanol self-administration, alcohol-preferring
  • Publication: Rodd et al. Pharmacol Biochem Behav. (2008) Differential gene expression in the nucleus accumbens with ethanol self-administration in inbred alcohol-preferring rats. PubMed
  • Dataset Summary: The current study examined the effects of operant ethanol (EtOH) self-administration on gene expression kin the nucleus accumbens (ACB) and amygdala (AMYG) of inbred alcohol-preferring (iP) rats. Rats self-trained on a standard two-lever operant paradigm to administer either water-water, EtOH (15% v/v)-water, or saccharin (SAC; 0.0125% g/v)-water. For the ACB, there were 513 significant differences at the p < 0.01 level in named genes: 55 between SAC and water; 215 between EtOH and water, and 243 between EtOH and SAC. In the case of the AMYG (p < 0.01), there were 48 between SAC and water, 23 between EtOH and water, and 63 between EtOH and SAC group.

    Gene list of this dataset (444 genes)
    Page: 1 2 3 4 5 6 7 8 9 list all   
    GeneIDSymbolNameGenetic locationOriginal ID1Original ID2
    314352Sel1lsel-1 suppressor of lin-12-like (C. elegans)6q31Sel1h 
    360792Styxl1serine/threonine/tyrosine interacting-like 112q12Styxl1 
    294708Sgtbsmall glutamine-rich tetratricopeptide repeat (TPR)-containing, beta2q13Sgtb 
    171365Snrpbsmall nuclear ribonucleoprotein polypeptides B and B13q36Snrpb 
    25349Scn2bsodium channel, voltage-gated, type II, beta8q22Scn2b 
    25551Slc2a3solute carrier family 2 (facilitated glucose transporter), member 34q42Slc2a3 
    50622Slc23a2solute carrier family 23 (nucleobase transporters), member 23q36Slc23a2 
    63878Stc2stanniocalcin 210q12Stc2 
    29734Stchstress 70 protein chaperone, microsome-associated11p11Stch 
    29149Strnstriatin, calmodulin binding protein6q11Strn 
    60565Syt6synaptotagmin VI2q34Syt6 
    296182Txndc13thioredoxin domain containing 133q36Txndc13 
    29362Tefthyrotroph embryonic factor7q34Tef 
    289883Tmed5transmembrane emp24 protein transport domain containing 514p22Tmed5 
    246332Uhmk1U2AF homology motif (UHM) kinase 113q24Uhmk1 
    315608Ube4aubiquitination factor E4A, UFD2 homolog (S. cerevisiae)8q22Ube4a 
    65277Vti1avesicle transport through interaction with t-SNAREs homolog 1A (yeast)1q55Vti1a 
    297930Wwp1WW domain containing E3 ubiquitin protein ligase 15q13Wwp1 
    282825Zfp161zinc finger protein 1619q38Zfp161 
    53982Zfp260zinc finger protein 2601q21Zfp260 
    170955Znf483zinc finger protein 4835q24Zfp483 
    360629Nt5c3l5'-nucleotidase, cytosolic III-like10q32.1Nt5c3l 
    64205Arbpacidic ribosomal phosphoprotein P012q16Arbp 
    24186Albalbumin14p22Alb 
    24186Albalbumin14p22Alb 
    79251Aspaaspartoacylase-Aspa 
    282546Arid1bAT rich interactive domain 1B (Swi1 like)1q11Arid1b 
    361439Abcb10ATP-binding cassette, sub-family B (MDR/TAP), member 1019q12Abcb10 
    170924Abcc4ATP-binding cassette, sub-family C (CFTR/MRP), member 415q24Abcc4 
    499356BlnkB-cell linker1q54Blnk 
    24223B2mbeta-2 microglobulin3q35B2m 
    25244Bckdhabranched chain ketoacid dehydrogenase E1, alpha polypeptide1q21Bckdha 
    29603Bckdkbranched chain ketoacid dehydrogenase kinase1q36Bckdk 
    84407Cdh11cadherin 1119p14Cdh11 
    117279CflarCASP8 and FADD-like apoptosis regulator9q31Cflar 
    84353Ctnnb1catenin (cadherin associated protein), beta 18q32Ctnnb1 
    363425Cav2caveolin 24q21Cav2 
    363425Cav2caveolin 24q21Cav2 
    652929Cd99CD99 antigen-Cd99 
    81652Ctbschitobiase, di-N-acetyl-2q44Ctbs 
    84360Clcn3chloride channel 316p12Clcn3 
    362578Ccdc23coiled-coil domain containing 235q36Ccdc23 
    24264Ckbcreatine kinase, brain6q32Ckb 
    363249Ctdsp1CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 19q33Ctdsp1 
    29428Cugbp2CUG triplet repeat, RNA binding protein 217q12.3Cugbp2 
    296229P22k15cystatin related protein 23q41P22k15 
    25282Cox6a1cytochrome c oxidase, subunit VIa, polypeptide 112q16Cox6a1 
    56266Cyp4f1cytochrome P450, family 4, subfamily f, polypeptide 17q11Cyp4f2 
    29318DdtD-dopachrome tautomerase20p12Ddt 
    83631Dedddeath effector domain-containing13q24Dedd 
    Page: 1 2 3 4 5 6 7 8 9 list all