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Dataset Description
  • Dataset Name: 18405950
  • Species: Rat
  • Method: Microarray
  • No. of Genes: 444
  • Tissue: Nucleus accumbens and amygdala
  • Phenotype: Ethanol self-administration, alcohol-preferring
  • Publication: Rodd et al. Pharmacol Biochem Behav. (2008) Differential gene expression in the nucleus accumbens with ethanol self-administration in inbred alcohol-preferring rats. PubMed
  • Dataset Summary: The current study examined the effects of operant ethanol (EtOH) self-administration on gene expression kin the nucleus accumbens (ACB) and amygdala (AMYG) of inbred alcohol-preferring (iP) rats. Rats self-trained on a standard two-lever operant paradigm to administer either water-water, EtOH (15% v/v)-water, or saccharin (SAC; 0.0125% g/v)-water. For the ACB, there were 513 significant differences at the p < 0.01 level in named genes: 55 between SAC and water; 215 between EtOH and water, and 243 between EtOH and SAC. In the case of the AMYG (p < 0.01), there were 48 between SAC and water, 23 between EtOH and water, and 63 between EtOH and SAC group.

    Gene list of this dataset (444 genes)
    Page: 1 2 3 4 5 6 7 8 9 list all   
    GeneIDSymbolNameGenetic locationOriginal ID1Original ID2
    64018Slc33a1solute carrier family 33 (acetyl-CoA transporter), member 12q31Slc33a1 
    25548Slc34a1solute carrier family 34 (sodium phosphate), member 117p14Slc34a1 
    84484Slc4a4solute carrier family 4 (anion exchanger), member 414p22Slc4a4 
    83792Scd2stearoyl-Coenzyme A desaturase 21q54Scd2 
    114100Sc5dsterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)8q22Sc5d 
    292683Sympksymplekin1q21Sympk 
    117559Sv2asynaptic vesicle glycoprotein 2a2q34Sv2a 
    24771Sdc4syndecan 43q42Sdc4 
    266764Tbkbp1TBK1 binding protein 110q31Tbkbp1 
    287944Thap7THAP domain containing 711q23Thap7 
    498407Purbpurine rich element binding protein B14q21pur-beta 
    361757Tmem10transmembrane protein 101q54Tmem10 
    24356Ets1v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)8q21Ets1 
    25361Vcam1vascular cell adhesion molecule 12q41Vcam1 
    297066Zfp212Zinc finger protein 2124q24Zfp212 
    298765Zfp36l2zinc finger protein 36, C3H type-like 26q12Zfp36l2 
    94188Zfp423zinc finger protein 42319p11Zfp423 
    361816Zfand3zinc finger, AN1-type domain 320p12Zfand3 
    310062Zswim6zinc finger, SWIM domain containing 62q14Zswim6 
    81745Pdpk13-phosphoinositide dependent protein kinase-110q12Pdpk1 
    140667Ap3m2adaptor-related protein complex 3, mu 2 subunit16q12.5Ap3m2 
    81635Adaradenosine deaminase, RNA-specific2q34Adar 
    246284Atrxalpha thalassemia/mental retardation syndrome X-linked homolog (human)Xq31Atrx 
    246284Atrxalpha thalassemia/mental retardation syndrome X-linked homolog (human)Xq31Atrx 
    64312Aplp2amyloid beta (A4) precursor-like protein 28q13Aplp2 
    54226Appamyloid beta (A4) precursor protein11q11App 
    54226Appamyloid beta (A4) precursor protein11q11App 
    303396Appbp2amyloid beta precursor protein (cytoplasmic tail) binding protein 210q26Appbp2 
    300756Arih1ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila)8q24Arih1 
    81732Actr3ARP3 actin-related protein 3 homolog (yeast)13q11Actr3 
    60331Atxn3ataxin 36q32Atxn3 
    29600Atp2b4ATPase, Ca++ transporting, plasma membrane 413q13Atp2b4 
    117596Atp6v1b2ATPase, H transporting, lysosomal V1 subunit B216p14Atp6v1b2 
    63879Birc4baculoviral IAP repeat-containing 4Xq11Birc4 
    361167Bag4BCL2-associated athanogene 416q12.4Bag4 
    304709Bfarbifunctional apoptosis regulator10q11Bfar 
    171113Blcapbladder cancer associated protein homolog (human)3q42Blcap 
    25667Bmp3bone morphogenetic protein 314p22Bmp3 
    58942Cacnb4calcium channel, voltage-dependent, beta 4 subunit3q12Cacnb4 
    58942Cacnb4calcium channel, voltage-dependent, beta 4 subunit3q12Cacnb4 
    25050Camk4calcium/calmodulin-dependent protein kinase IV18p12Camk4 
    25050Camk4calcium/calmodulin-dependent protein kinase IV18p12Camk4 
    65199Kcnip3Kv channel interacting protein 3, calsenilin3q36Csen 
    58822Csnk1ecasein kinase 1, epsilon7q34Csnk1e 
    24268Cpceruloplasmin2q24Cp 
    295230Cct3chaperonin subunit 3 (gamma)2q34Cct3 
    65129Cldn1claudin 111q22Cldn1 
    84389Ccnhcyclin H-Ccnh 
    155696Dcbld2discoidin, CUB and LCCL domain containing 211q12Dcbld2 
    64053Dlg2discs, large homolog 2 (Drosophila)1q32Dlgh2 
    Page: 1 2 3 4 5 6 7 8 9 list all