Search results: The pahtway p4048 has 109 genes in the original annotation. Currently, there are 68 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
8829NRP1BDCA4 | CD304 | NP1 | NRP | VEGF165Rneuropilin 110p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3422IDI1IPP1 | IPPI1isopentenyl-diphosphate delta isomerase 110p15.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Expression
54541DDIT4Dig2 | REDD-1 | REDD1DNA damage inducible transcript 410q22.1CV:PGCnp
DMG:Jaffe_2016
55760DHX32DDX32 | DHLP1DEAH-box helicase 32 (putative)10q26.2CV:PGCnp
GSMA_IIA
Ascano FMRP targets
84441MAML2MAM-3 | MAM2 | MAM3 | MLL-MAML2mastermind like transcriptional coactivator 211q21CV:PGCnp
DNM:Fromer_2014
CompositeSet
3145HMBSPBG-D | PBGD | PORC | UPShydroxymethylbilane synthase11q23.3Association
CV:PGCnp
GSMA_I
51474LIMA1EPLIN | SREBP3LIM domain and actin binding 112q13CV:PGCnp
DMG:Wockner_2014
55652SLC48A1HRG-1 | HRG1 | hHRG-1solute carrier family 48 member 112q13.11CV:PGCnp
DEG:Zhao_2015
694BTG1-B-cell translocation gene 1, anti-proliferative12q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4008LMO7FBX20 | FBXO20 | LOMPLIM domain 713q22.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Ascano FMRP targets
5283PIGHGPI-Hphosphatidylinositol glycan anchor biosynthesis class H14q24.1DMG:Nishioka_2013
5641LGMNAEP | LGMN1 | PRSC1legumain14q32.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
84888SPPL2AIMP3 | PSL2signal peptide peptidase like 2A15q21.2CV:PGCnp
PMID:cooccur
1362CPDGP180carboxypeptidase D17q11.2CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
2886GRB7-growth factor receptor bound protein 717q12CV:PGCnp
Network
8396PIP4K2BPI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KBphosphatidylinositol-5-phosphate 4-kinase, type II, beta17q12CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
6662SOX9CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10SRY-box 917q24.3CV:PGCnp
PMID:cooccur
7050TGIF1HPE4 | TGIFTGFB induced factor homeobox 118p11.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
57724EPG5HEEW1 | KIAA1632 | VICISectopic P-granules autophagy protein 5 homolog (C. elegans)18q12.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
4092SMAD7CRCS3 | MADH7 | MADH8SMAD family member 718q21.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
4803NGFBeta-NGF | HSAN5 | NGFBnerve growth factor1p13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
58497PRUNEDRES-17 | DRES17 | HTCD37prune exopolyphosphatase1q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
6707SPRR3-small proline rich protein 31q21-q22DMG:Wockner_2014
GSMA_I
GSMA_IIA
2702GJA5ATFB11 | CX40gap junction protein alpha 51q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
26750RPS6KC1RPK118 | RSKL1 | S6K-delta-1 | S6PKh1 | humS6PKh1ribosomal protein S6 kinase C11q41CV:GWASdb
CV:PGCnp
1454CSNK1ECKIepsilon | HCKIEcasein kinase 1 epsilon22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
2355FOSL2FRA2FOS like antigen 22p23.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6574SLC20A1GLVR1 | Glvr-1 | PIT1 | PiT-1solute carrier family 20 member 12q13CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
51776ZAKAZK | MLK7 | MLT | MLTK | MRK | mlklak | pksterile alpha motif and leucine zipper containing kinase AZK2q24.2CV:PGCnp
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
4664NAB1-NGFI-A binding protein 12q32.3-q33CV:PGCnp
26010SPATS2LDNAPTP6 | SGNPspermatogenesis associated serine rich 2 like2q33.1CV:GWASdb
CV:PGCnp
LK:YES
57679ALS2ALS2CR6 | ALSJ | IAHSP | PLSJALS2, alsin Rho guanine nucleotide exchange factor2q33.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
65065NBEAL1A530083I02Rik | ALS2CR16 | ALS2CR17neurobeachin like 12q33.2CV:PGCnp
8553BHLHE40BHLHB2 | DEC1 | HLHB2 | SHARP-2 | STRA13 | Stra14basic helix-loop-helix family member e403p26CV:PGCnp
PMID:cooccur
6498SKILSNO | SnoA | SnoI | SnoNSKI-like proto-oncogene3q26CV:PGCnp
Network
PMID:cooccur
11235PDCD10CCM3 | TFAR15programmed cell death 103q26.1CV:PGCnp
54502RBM47NET18RNA binding motif protein 474p14CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
23216TBC1D1TBC | TBC1TBC1 domain family member 14p14CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
174AFPAFPD | FETA | HPAFPalpha fetoprotein4q13.3CV:PGCnp
PMID:cooccur
2919CXCL1FSP | GRO1 | GROa | MGSA | MGSA-a | NAP-3 | SCYB1C-X-C motif chemokine ligand 14q21CV:PGCnp
GO_Annotation
PMID:cooccur
3627CXCL10C7 | IFI10 | INP10 | IP-10 | SCYB10 | crg-2 | gIP-10 | mob-1C-X-C motif chemokine ligand 104q21CV:PGCnp
PMID:cooccur
115548FCHO2-FCH domain only 25q13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
57222ERGIC1ERGIC-32 | ERGIC32 | NET24endoplasmic reticulum-golgi intermediate compartment 15q35.1CV:PGCnp
Expression
GSMA_IIA
9260PDLIM7LMP1 | LMP3PDZ and LIM domain 75q35.3CV:PGCnp
GSMA_IIA
Network
2030SLC29A1ENT1solute carrier family 29 member 16p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
23304UBR2C6orf133 | bA49A4.1 | dJ242G1.1 | dJ392M17.3ubiquitin protein ligase E3 component n-recognin 26p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
780DDR1CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKEdiscoidin domain receptor tyrosine kinase 16p21.3Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
177AGERRAGEadvanced glycosylation end product-specific receptor6p21.3CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
6659SOX4EVI16SRY-box 46p22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
94234FOXQ1HFH1forkhead box Q16p25CV:PGCnp
GSMA_I
PMID:cooccur
262AMD1ADOMETDC | AMD | SAMDCadenosylmethionine decarboxylase 16q21CV:PGCnp
DMG:Wockner_2014
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
1364CLDN4CPE-R | CPER | CPETR | CPETR1 | WBSCR8 | hCPE-Rclaudin 47q11.23CNV:YES
CV:PGCnp
GO_Annotation
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
5327PLATT-PA | TPAplasminogen activator, tissue type8p12CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
Potential synaptic genes
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
80124VCPIP1DUBA3 | VCIP135valosin containing protein (p97)/p47 complex interacting protein 18q13CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
Ascano FMRP targets
92421CHMP4CSNF7-3 | Shax3 | VPS32Ccharged multivesicular body protein 4C8q21.13CV:GWASdb
CV:PGCnp
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
203228C9orf72ALSFTD | FTDALS | FTDALS1chromosome 9 open reading frame 729p21.2CV:PGCnp
Expression
PMID:cooccur
11046SLC35D2HFRC1 | SQV7L | UGTrel8 | hfrcsolute carrier family 35 member D29q22.32CV:PGCnp
2010EMDEDMD | LEMD5 | STAemerinXq28CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur