DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ASTST
Uniprot ID:
P48668
Source protein:
Keratin, type II cytoskeletal 6C
Source gene:
KRT6C
Class:
DEG_SPOP_SBC_1
Location:
2:6
E3 ligase:
SPOP
DEGRON score:
0.9972
ASA_SCORE:
70.86
COIL:
0.7354
CONS_SCORE:
0.4723
DSS_SCORE:
0.8892
HELIX:
0.0092
FCONS_SCORE:
1.0953
RIG_SCORE:
0.6736
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S13N
TCGA-A8-A07G
BRCA
TCGA
ASTST
DEG_SPOP_SBC_1
0.1389
p.S13N
DO2870
BRCA
ICGC
ASTST
DEG_SPOP_SBC_1
0.1389
p.T4A
TCGA-AP-A0LM
UCEC
TCGA
ASTST
DEG_SPOP_SBC_1
0.7139
p.T4A
DO43306
UCEC
ICGC
ASTST
DEG_SPOP_SBC_1
0.7139
p.R16W
TCGA-DF-A2KU
UCEC
TCGA
ASTST
DEG_SPOP_SBC_1
0.0556
p.R16W
DO223286
UCEC
ICGC
ASTST
DEG_SPOP_SBC_1
0.0556
p.S12N
TCGA-DU-6392
LGG
TCGA
ASTST
DEG_SPOP_SBC_1
0.1667
p.S12N
DO22237
LGG
ICGC
ASTST
DEG_SPOP_SBC_1
0.1667
p.R15H
TCGA-DX-A3M2
SARC
TCGA
ASTST
DEG_SPOP_SBC_1
0.0833
p.R15H
DO219971
SARC
ICGC
ASTST
DEG_SPOP_SBC_1
0.0833
p.S5F
TCGA-EE-A3AG
SKCM
TCGA
ASTST
DEG_SPOP_SBC_1
0.9093
p.S5F
DO37471
SKCM
ICGC
ASTST
DEG_SPOP_SBC_1
0.9093
p.S14R
DO228815
LICA
ICGC
ASTST
DEG_SPOP_SBC_1
0.1111
p.S13C
DO231191
LUSC
ICGC
ASTST
DEG_SPOP_SBC_1
0.1389
p.R16Q
DO46378
OV
ICGC
ASTST
DEG_SPOP_SBC_1
0.0556
p.S5C
SIDM00711
Squamous Cell Lung Carcinoma
GDSC
ASTST
DEG_SPOP_SBC_1
0.8652
p.S5C
ACH-000727
Lung Cancer
CCLE
ASTST
DEG_SPOP_SBC_1
0.8652
p.S5C
NCI-H2066
lung
COSMIC
ASTST
DEG_SPOP_SBC_1
0.8652
p.R15C
SIDM01368
Gastric Carcinoma
GDSC
ASTST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with KRT6C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ASTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NNY8
Ubiquitin carboxyl-terminal hydrolase 27
DEG_SPOP_SBC_1
27:31
ASTST
SPOP
0.9855
More...
O14490
Disks large-associated protein 1
DEG_SPOP_SBC_1
734:738
ASTST
SPOP
0.8404
More...
O15479
Melanoma-associated antigen B2
DEG_SPOP_SBC_1
99:103
ASTST
SPOP
0.8869
More...
O15481
Melanoma-associated antigen B4
DEG_SPOP_SBC_1
97:101
ASTST
SPOP
0.6734
More...
O95153
Peripheral-type benzodiazepine receptor-associated protein 1
DEG_SPOP_SBC_1
1169:1173
ASTST
SPOP
0.9333
More...
P02538
Keratin, type II cytoskeletal 6A
DEG_SPOP_SBC_1
2:6
ASTST
SPOP
0.999
More...
P04259
Keratin, type II cytoskeletal 6B
DEG_SPOP_SBC_1
2:6
ASTST
SPOP
0.9988
More...
P48668
Keratin, type II cytoskeletal 6C
DEG_SPOP_SBC_1
2:6
ASTST
SPOP
0.9972
More...
Q6K0P9
Pyrin and HIN domain-containing protein 1
DEG_SPOP_SBC_1
167:171
ASTST
SPOP
0.8521
More...
Q86XK2
F-box only protein 11
DEG_SPOP_SBC_1
122:126
ASTST
SPOP
0.9941
More...
Q96FF9
Sororin
DEG_SPOP_SBC_1
155:159
ASTST
SPOP
0.9985
More...
Q99583
Max-binding protein MNT
DEG_SPOP_SBC_1
327:331
ASTST
SPOP
0.9874
More...
Q9C0F0
Putative Polycomb group protein ASXL3
DEG_SPOP_SBC_1
1037:1041
ASTST
SPOP
0.9933
More...
Q9HCI7
E3 ubiquitin-protein ligase MSL2
DEG_SPOP_SBC_1
539:543
ASTST
SPOP
0.6886
More...
Q9UBY0
Sodium/hydrogen exchanger 2
DEG_SPOP_SBC_1
660:664
ASTST
SPOP
0.9628
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1446:1450
ASTST
SPOP
0.9987
More...
Q9UNF1
Melanoma-associated antigen D2
DEG_SPOP_SBC_1
551:555
ASTST
SPOP
0.8329
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2152:2156
ASTST
SPOP
0.9897
More...
Q8IWB9
Testis-expressed protein 2
DEG_SPOP_SBC_1
177:181
ASTST
SPOP
0.9989
More...
A6NM11
Leucine-rich repeat-containing protein 37A2
DEG_SPOP_SBC_1
824:828
ASTST
SPOP
0.9534
More...
A6NMS7
Leucine-rich repeat-containing protein 37A
DEG_SPOP_SBC_1
824:828
ASTST
SPOP
0.9582
More...
O60309
Leucine-rich repeat-containing protein 37A3
DEG_SPOP_SBC_1
824:828
ASTST
SPOP
0.9382
More...
Q15884
Protein FAM189A2
DEG_SPOP_SBC_1
247:251
ASTST
SPOP
0.9933
More...
Q96QE4
Leucine-rich repeat-containing protein 37B
DEG_SPOP_SBC_1
514:518
ASTST
SPOP
0.9492
More...