DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
PGTST
Uniprot ID:
O95255
Source protein:
ATP-binding cassette sub-family C member 6
Source gene:
ABCC6
Class:
DEG_SPOP_SBC_1
Location:
867:871
E3 ligase:
SPOP
DEGRON score:
0.7523
ASA_SCORE:
74.28
COIL:
0.9102
CONS_SCORE:
0.2548
DSS_SCORE:
0.8573
HELIX:
0.0504
FCONS_SCORE:
1.0413
RIG_SCORE:
0.5551
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G868W
TCGA-18-3410
LUSC
TCGA
PGTST
DEG_SPOP_SBC_1
0.6714
p.G868W
DO26456
LUSC
ICGC
PGTST
DEG_SPOP_SBC_1
0.6714
p.S878F
TCGA-A5-A2K5
UCEC
TCGA
PGTST
DEG_SPOP_SBC_1
0.1389
p.S878F
DO41379
UCEC
ICGC
PGTST
DEG_SPOP_SBC_1
0.1389
p.G876C
TCGA-B5-A1MX
UCEC
TCGA
PGTST
DEG_SPOP_SBC_1
0.1944
p.G876C
DO41999
UCEC
ICGC
PGTST
DEG_SPOP_SBC_1
0.1944
p.E864K
TCGA-B5-A3FC
UCEC
TCGA
PGTST
DEG_SPOP_SBC_1
0.25
p.E864K
DO41871
UCEC
ICGC
PGTST
DEG_SPOP_SBC_1
0.25
p.G863R
TCGA-D3-A1Q6
SKCM
TCGA
PGTST
DEG_SPOP_SBC_1
0.2222
p.G863R
DO37450
SKCM
ICGC
PGTST
DEG_SPOP_SBC_1
0.2222
p.G863E
TCGA-D3-A2JO
SKCM
TCGA
PGTST
DEG_SPOP_SBC_1
0.2222
p.G863E
DO47619
SKCM
ICGC
PGTST
DEG_SPOP_SBC_1
0.2222
p.G861E
TCGA-D3-A8GO
SKCM
TCGA
PGTST
DEG_SPOP_SBC_1
0.1667
p.G861E
DO51242
SKCM
ICGC
PGTST
DEG_SPOP_SBC_1
0.1667
p.G861E
ACH-002672
Pancreatic Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.1667
p.G880C
DO222454
BTCA
ICGC
PGTST
DEG_SPOP_SBC_1
0.0833
p.R875K
SIDM00545
Melanoma
GDSC
PGTST
DEG_SPOP_SBC_1
0.2222
p.R875K
ACH-000987
Skin Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.2222
p.R875K
Mewo
skin
COSMIC
PGTST
DEG_SPOP_SBC_1
0.2222
p.E863A
HCC1500
breast
COSMIC
PGTST
DEG_SPOP_SBC_1
0.2222
Drug responses associated with ABCC6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15178
T-box transcription factor T
DEG_SPOP_SBC_1
249:253
PGTST
SPOP
0.9835
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1981:1985
PGTST
SPOP
0.9944
More...
O95255
ATP-binding cassette sub-family C member 6
DEG_SPOP_SBC_1
867:871
PGTST
SPOP
0.7523
More...
P02751
Fibronectin
DEG_SPOP_SBC_1
2242:2246
PGTST
SPOP
0.9855
More...
P24592
Insulin-like growth factor-binding protein 6
DEG_SPOP_SBC_1
141:145
PGTST
SPOP
0.9935
More...
Q04726
Transducin-like enhancer protein 3
DEG_SPOP_SBC_1
329:333
PGTST
SPOP
0.9981
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
1253:1257
PGTST
SPOP
0.5326
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
514:518
PGTST
SPOP
0.9981
More...
Q5VST9
Obscurin
DEG_SPOP_SBC_1
212:216
PGTST
SPOP
0.5286
More...
Q8NAP3
Zinc finger and BTB domain-containing protein 38
DEG_SPOP_SBC_1
825:829
PGTST
SPOP
0.7458
More...
Q8WWQ0
PH-interacting protein
DEG_SPOP_SBC_1
1293:1297
PGTST
SPOP
0.8833
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12203:12207
PGTST
SPOP
0.9874
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12359:12363
PGTST
SPOP
0.8271
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12517:12521
PGTST
SPOP
0.5411
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12828:12832
PGTST
SPOP
0.9788
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12984:12988
PGTST
SPOP
0.9729
More...
Q96PU4
E3 ubiquitin-protein ligase UHRF2
DEG_SPOP_SBC_1
81:85
PGTST
SPOP
0.9892
More...
Q96QS3
Homeobox protein ARX
DEG_SPOP_SBC_1
553:557
PGTST
SPOP
0.979
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
868:872
PGTST
SPOP
0.9813
More...
Q9H4F8
SPARC-related modular calcium-binding protein 1
DEG_SPOP_SBC_1
281:285
PGTST
SPOP
0.8861
More...
Q496Y0
LON peptidase N-terminal domain and RING finger protein 3
DEG_SPOP_SBC_1
60:64
PGTST
SPOP
0.9986
More...
Q86X27
Ras-specific guanine nucleotide-releasing factor RalGPS2
DEG_SPOP_SBC_1
286:290
PGTST
SPOP
0.9983
More...
Q96G46
tRNA-dihydrouridine
DEG_SPOP_SBC_1
269:273
PGTST
SPOP
0.9172
More...
Q9BZA0
Putative transcript Y 10 protein
DEG_SPOP_SBC_1
39:43
PGTST
SPOP
0.938
More...