DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PGTST
Uniprot ID:
P24592
Source protein:
Insulin-like growth factor-binding protein 6
Source gene:
IGFBP6
Class:
DEG_SPOP_SBC_1
Location:
141:145
E3 ligase:
SPOP
DEGRON score:
0.9935
ASA_SCORE:
82.14
COIL:
0.9422
CONS_SCORE:
0.6223
DSS_SCORE:
0.9071
HELIX:
0.0192
FCONS_SCORE:
1.3476
RIG_SCORE:
0.5031
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G142D
TCGA-AX-A06F
UCEC
TCGA
PGTST
DEG_SPOP_SBC_1
0.6087
p.S152Y
TCGA-BS-A0UF
UCEC
TCGA
PGTST
DEG_SPOP_SBC_1
0.1389
p.R139K
TCGA-EB-A6R0
SKCM
TCGA
PGTST
DEG_SPOP_SBC_1
0.2778
p.A153T
TCGA-YL-A8SB
PRAD
TCGA
PGTST
DEG_SPOP_SBC_1
0.1111
p.A151T
DO11854
GBM
ICGC
PGTST
DEG_SPOP_SBC_1
0.1667
p.A151T
DO51426
PRAD
ICGC
PGTST
DEG_SPOP_SBC_1
0.1667
p.R137K
DO220887
MELA
ICGC
PGTST
DEG_SPOP_SBC_1
0.2222
p.R137K
DO48646
SKCM
ICGC
PGTST
DEG_SPOP_SBC_1
0.2222
p.V153A
DO46438
OV
ICGC
PGTST
DEG_SPOP_SBC_1
0.1111
p.V153F
DO46438
OV
ICGC
PGTST
DEG_SPOP_SBC_1
0.1111
p.G140D
DO41752
UCEC
ICGC
PGTST
DEG_SPOP_SBC_1
0.3056
p.S150Y
DO41488
UCEC
ICGC
PGTST
DEG_SPOP_SBC_1
0.1944
p.S148F
SIDM00790
Non-Cancerous
GDSC
PGTST
DEG_SPOP_SBC_1
0.25
p.S148F
SIDM00775
Non-Small Cell Lung Carcinoma
GDSC
PGTST
DEG_SPOP_SBC_1
0.25
p.P141S
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PGTST
DEG_SPOP_SBC_1
0.6752
p.P141S
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PGTST
DEG_SPOP_SBC_1
0.6752
p.D136G
SIDM01618
B-Lymphoblastic Leukemia
GDSC
PGTST
DEG_SPOP_SBC_1
0.1944
p.D155N
ACH-000522
Bladder Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.0556
p.D155N
UM-UC-3
urinary_tract
COSMIC
PGTST
DEG_SPOP_SBC_1
0.0556
p.D134G
ACH-000942
Leukemia
CCLE
PGTST
DEG_SPOP_SBC_1
0.1389
p.P150S
ACH-000995
Leukemia
CCLE
PGTST
DEG_SPOP_SBC_1
0.1944
p.P139S
ACH-001127
Leukemia
CCLE
PGTST
DEG_SPOP_SBC_1
0.2778
p.P139S
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PGTST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with IGFBP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15178
T-box transcription factor T
DEG_SPOP_SBC_1
249:253
PGTST
SPOP
0.9835
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1981:1985
PGTST
SPOP
0.9944
More...
O95255
ATP-binding cassette sub-family C member 6
DEG_SPOP_SBC_1
867:871
PGTST
SPOP
0.7523
More...
P02751
Fibronectin
DEG_SPOP_SBC_1
2242:2246
PGTST
SPOP
0.9855
More...
P24592
Insulin-like growth factor-binding protein 6
DEG_SPOP_SBC_1
141:145
PGTST
SPOP
0.9935
More...
Q04726
Transducin-like enhancer protein 3
DEG_SPOP_SBC_1
329:333
PGTST
SPOP
0.9981
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
1253:1257
PGTST
SPOP
0.5326
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
514:518
PGTST
SPOP
0.9981
More...
Q5VST9
Obscurin
DEG_SPOP_SBC_1
212:216
PGTST
SPOP
0.5286
More...
Q8NAP3
Zinc finger and BTB domain-containing protein 38
DEG_SPOP_SBC_1
825:829
PGTST
SPOP
0.7458
More...
Q8WWQ0
PH-interacting protein
DEG_SPOP_SBC_1
1293:1297
PGTST
SPOP
0.8833
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12203:12207
PGTST
SPOP
0.9874
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12359:12363
PGTST
SPOP
0.8271
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12517:12521
PGTST
SPOP
0.5411
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12828:12832
PGTST
SPOP
0.9788
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12984:12988
PGTST
SPOP
0.9729
More...
Q96PU4
E3 ubiquitin-protein ligase UHRF2
DEG_SPOP_SBC_1
81:85
PGTST
SPOP
0.9892
More...
Q96QS3
Homeobox protein ARX
DEG_SPOP_SBC_1
553:557
PGTST
SPOP
0.979
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
868:872
PGTST
SPOP
0.9813
More...
Q9H4F8
SPARC-related modular calcium-binding protein 1
DEG_SPOP_SBC_1
281:285
PGTST
SPOP
0.8861
More...
Q496Y0
LON peptidase N-terminal domain and RING finger protein 3
DEG_SPOP_SBC_1
60:64
PGTST
SPOP
0.9986
More...
Q86X27
Ras-specific guanine nucleotide-releasing factor RalGPS2
DEG_SPOP_SBC_1
286:290
PGTST
SPOP
0.9983
More...
Q96G46
tRNA-dihydrouridine
DEG_SPOP_SBC_1
269:273
PGTST
SPOP
0.9172
More...
Q9BZA0
Putative transcript Y 10 protein
DEG_SPOP_SBC_1
39:43
PGTST
SPOP
0.938
More...