DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PGTST
Uniprot ID:
Q9H4F8
Source protein:
SPARC-related modular calcium-binding protein 1
Source gene:
SMOC1
Class:
DEG_SPOP_SBC_1
Location:
281:285
E3 ligase:
SPOP
DEGRON score:
0.8861
ASA_SCORE:
58.18
COIL:
0.7284
CONS_SCORE:
0.6758
DSS_SCORE:
0.3511
HELIX:
0.0706
FCONS_SCORE:
1.1053
RIG_SCORE:
0.7155
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R278H
TCGA-63-A5MM
LUSC
TCGA
PGTST
DEG_SPOP_SBC_1
0.25
p.R278H
TCGA-G4-6309
COAD
TCGA
PGTST
DEG_SPOP_SBC_1
0.25
p.R278H
DO7810
COAD
ICGC
PGTST
DEG_SPOP_SBC_1
0.25
p.R278H
DO219153
LUSC
ICGC
PGTST
DEG_SPOP_SBC_1
0.25
p.R278H
SIDM01772
Mesothelioma
GDSC
PGTST
DEG_SPOP_SBC_1
0.25
p.R278H
ACH-000531
Non-Cancerous
CCLE
PGTST
DEG_SPOP_SBC_1
0.25
p.R278C
TCGA-99-8025
LUAD
TCGA
PGTST
DEG_SPOP_SBC_1
0.25
p.R278C
TCGA-LN-A8I1
ESCA
TCGA
PGTST
DEG_SPOP_SBC_1
0.25
p.R278C
DO24255
LUAD
ICGC
PGTST
DEG_SPOP_SBC_1
0.25
p.V288M
TCGA-D5-6530
COAD
TCGA
PGTST
DEG_SPOP_SBC_1
0.25
p.V288M
DO8312
COAD
ICGC
PGTST
DEG_SPOP_SBC_1
0.25
p.V288M
DO51959
PRAD
ICGC
PGTST
DEG_SPOP_SBC_1
0.25
p.R286H
TCGA-EE-A3JA
SKCM
TCGA
PGTST
DEG_SPOP_SBC_1
0.3056
p.R286H
DO47625
SKCM
ICGC
PGTST
DEG_SPOP_SBC_1
0.3056
p.R286H
SIDM00377
Other Sarcomas
GDSC
PGTST
DEG_SPOP_SBC_1
0.3056
p.R286H
SKN
soft_tissue
COSMIC
PGTST
DEG_SPOP_SBC_1
0.3056
p.S294N
DO224977
BRCA
ICGC
PGTST
DEG_SPOP_SBC_1
0.0833
p.P279A
SIDM00120
Prostate Carcinoma
GDSC
PGTST
DEG_SPOP_SBC_1
0.2778
p.P279A
ACH-000979
Prostate Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.2778
p.P279A
DU-145
prostate
COSMIC
PGTST
DEG_SPOP_SBC_1
0.2778
p.M289I
SIDM00537
Colorectal Carcinoma
GDSC
PGTST
DEG_SPOP_SBC_1
0.2222
p.M289I
ACH-000982
Colon/Colorectal Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.2222
p.M289I
ACH-001345
Colon/Colorectal Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.2222
p.M289I
GP5d
large_intestine
COSMIC
PGTST
DEG_SPOP_SBC_1
0.2222
p.C292S
SIDM01617
Endometrial Carcinoma
GDSC
PGTST
DEG_SPOP_SBC_1
0.1389
p.C292S
ACH-000994
Endometrial/Uterine Cancer
CCLE
PGTST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with SMOC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15178
T-box transcription factor T
DEG_SPOP_SBC_1
249:253
PGTST
SPOP
0.9835
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
1981:1985
PGTST
SPOP
0.9944
More...
O95255
ATP-binding cassette sub-family C member 6
DEG_SPOP_SBC_1
867:871
PGTST
SPOP
0.7523
More...
P02751
Fibronectin
DEG_SPOP_SBC_1
2242:2246
PGTST
SPOP
0.9855
More...
P24592
Insulin-like growth factor-binding protein 6
DEG_SPOP_SBC_1
141:145
PGTST
SPOP
0.9935
More...
Q04726
Transducin-like enhancer protein 3
DEG_SPOP_SBC_1
329:333
PGTST
SPOP
0.9981
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
1253:1257
PGTST
SPOP
0.5326
More...
Q2KHR2
DNA-binding protein RFX7
DEG_SPOP_SBC_1
514:518
PGTST
SPOP
0.9981
More...
Q5VST9
Obscurin
DEG_SPOP_SBC_1
212:216
PGTST
SPOP
0.5286
More...
Q8NAP3
Zinc finger and BTB domain-containing protein 38
DEG_SPOP_SBC_1
825:829
PGTST
SPOP
0.7458
More...
Q8WWQ0
PH-interacting protein
DEG_SPOP_SBC_1
1293:1297
PGTST
SPOP
0.8833
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12203:12207
PGTST
SPOP
0.9874
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12359:12363
PGTST
SPOP
0.8271
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12517:12521
PGTST
SPOP
0.5411
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12828:12832
PGTST
SPOP
0.9788
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12984:12988
PGTST
SPOP
0.9729
More...
Q96PU4
E3 ubiquitin-protein ligase UHRF2
DEG_SPOP_SBC_1
81:85
PGTST
SPOP
0.9892
More...
Q96QS3
Homeobox protein ARX
DEG_SPOP_SBC_1
553:557
PGTST
SPOP
0.979
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
868:872
PGTST
SPOP
0.9813
More...
Q9H4F8
SPARC-related modular calcium-binding protein 1
DEG_SPOP_SBC_1
281:285
PGTST
SPOP
0.8861
More...
Q496Y0
LON peptidase N-terminal domain and RING finger protein 3
DEG_SPOP_SBC_1
60:64
PGTST
SPOP
0.9986
More...
Q86X27
Ras-specific guanine nucleotide-releasing factor RalGPS2
DEG_SPOP_SBC_1
286:290
PGTST
SPOP
0.9983
More...
Q96G46
tRNA-dihydrouridine
DEG_SPOP_SBC_1
269:273
PGTST
SPOP
0.9172
More...
Q9BZA0
Putative transcript Y 10 protein
DEG_SPOP_SBC_1
39:43
PGTST
SPOP
0.938
More...