DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CPH
CGC
Degron:
PNSSS
Uniprot ID:
Q15434
Source protein:
RNA-binding motif, single-stranded-interacting protein 2
Source gene:
RBMS2
Class:
DEG_SPOP_SBC_1
Location:
41:45
E3 ligase:
SPOP
DEGRON score:
0.6568
ASA_SCORE:
84.34
COIL:
0.9352
CONS_SCORE:
0.5161
DSS_SCORE:
0.7975
HELIX:
0.0384
FCONS_SCORE:
0.903
RIG_SCORE:
0.4886
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S54R
TCGA-12-0778
GBM
TCGA
PNSSS
DEG_SPOP_SBC_1
0.0833
p.S54R
DO11411
GBM
ICGC
PNSSS
DEG_SPOP_SBC_1
0.0833
p.K55N
TCGA-AA-A00N
COAD
TCGA
PNSSS
DEG_SPOP_SBC_1
0.1667
p.K55N
DO9876
COAD
ICGC
PNSSS
DEG_SPOP_SBC_1
0.1667
p.S43N
TCGA-FI-A2D5
UCEC
TCGA
PNSSS
DEG_SPOP_SBC_1
0.7069
p.S43N
DO41331
UCEC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.7069
p.P41H
TCGA-HU-A4H2
STAD
TCGA
PNSSS
DEG_SPOP_SBC_1
0.7694
p.P41H
DO47825
STAD
ICGC
PNSSS
DEG_SPOP_SBC_1
0.7694
p.G49V
TCGA-XF-A9SJ
BLCA
TCGA
PNSSS
DEG_SPOP_SBC_1
0.2222
p.G49V
DO219045
BLCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.2222
p.E41D
DO51878
BLCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6758
p.R40P
DO219068
BLCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.75
p.E41K
DO225159
BRCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.7022
p.E41K
DO227790
BRCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.7022
p.Q52H
DO229029
LICA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.1389
p.P32L
DO50955
LICA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.0833
p.P32L
DO37410
SKCM
ICGC
PNSSS
DEG_SPOP_SBC_1
0.0833
p.G51S
DO232017
ORCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.1667
p.R40H
DO34696
PACA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.75
p.K53N
DO36556
READ
ICGC
PNSSS
DEG_SPOP_SBC_1
0.1111
p.T45I
DO51749
STAD
ICGC
PNSSS
DEG_SPOP_SBC_1
0.7078
p.K31N
DO42673
UCEC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.0556
p.N50S
SIDM01617
Endometrial Carcinoma
GDSC
PNSSS
DEG_SPOP_SBC_1
0.1944
p.N50S
ACH-000994
Endometrial/Uterine Cancer
CCLE
PNSSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with RBMS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15117
FYN-binding protein 1
DEG_SPOP_SBC_1
26:30
PNSSS
SPOP
0.994
More...
O60741
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
DEG_SPOP_SBC_1
7:11
PNSSS
SPOP
0.7976
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2093:2097
PNSSS
SPOP
0.9431
More...
O94812
BAI1-associated protein 3
DEG_SPOP_SBC_1
423:427
PNSSS
SPOP
0.6757
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1389:1393
PNSSS
SPOP
0.9056
More...
P56177
Homeobox protein DLX-1
DEG_SPOP_SBC_1
218:222
PNSSS
SPOP
0.9889
More...
Q16666
Gamma-interferon-inducible protein 16
DEG_SPOP_SBC_1
177:181
PNSSS
SPOP
0.9508
More...
Q16832
Discoidin domain-containing receptor 2
DEG_SPOP_SBC_1
672:676
PNSSS
SPOP
0.678
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
606:610
PNSSS
SPOP
0.9659
More...
Q7L7V1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
DEG_SPOP_SBC_1
9:13
PNSSS
SPOP
0.6156
More...
Q86V97
Kelch repeat and BTB domain-containing protein 6
DEG_SPOP_SBC_1
315:319
PNSSS
SPOP
0.8742
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
334:338
PNSSS
SPOP
0.9909
More...
Q8N9N5
Protein BANP
DEG_SPOP_SBC_1
338:342
PNSSS
SPOP
0.9929
More...
Q8NHG8
E3 ubiquitin-protein ligase ZNRF2
DEG_SPOP_SBC_1
104:108
PNSSS
SPOP
0.9921
More...
Q8WVZ9
Kelch repeat and BTB domain-containing protein 7
DEG_SPOP_SBC_1
315:319
PNSSS
SPOP
0.9389
More...
Q8WXX7
Autism susceptibility gene 2 protein
DEG_SPOP_SBC_1
1008:1012
PNSSS
SPOP
0.7835
More...
Q96N67
Dedicator of cytokinesis protein 7
DEG_SPOP_SBC_1
860:864
PNSSS
SPOP
0.9622
More...
Q9H1B7
Probable E3 ubiquitin-protein ligase IRF2BPL
DEG_SPOP_SBC_1
216:220
PNSSS
SPOP
0.9952
More...
Q9NQ87
Hairy/enhancer-of-split related with YRPW motif-like protein
DEG_SPOP_SBC_1
298:302
PNSSS
SPOP
0.9384
More...
Q9ULH7
Myocardin-related transcription factor B
DEG_SPOP_SBC_1
1056:1060
PNSSS
SPOP
0.9777
More...
Q15434
RNA-binding motif, single-stranded-interacting protein 2
DEG_SPOP_SBC_1
41:45
PNSSS
SPOP
0.6568
More...
Q9BXY5
Calcyphosin-2
DEG_SPOP_SBC_1
92:96
PNSSS
SPOP
0.9192
More...