DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNSSS
Uniprot ID:
Q16666
Source protein:
Gamma-interferon-inducible protein 16
Source gene:
IFI16
Class:
DEG_SPOP_SBC_1
Location:
177:181
E3 ligase:
SPOP
DEGRON score:
0.9508
ASA_SCORE:
83.14
COIL:
0.9346
CONS_SCORE:
0.4067
DSS_SCORE:
0.7125
HELIX:
0.0512
FCONS_SCORE:
0.896
RIG_SCORE:
0.494
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E183D
TCGA-06-1084
GBM
TCGA
PNSSS
DEG_SPOP_SBC_1
0.2778
p.E183D
DO11106
GBM
ICGC
PNSSS
DEG_SPOP_SBC_1
0.2778
p.K170N
TCGA-AA-3666
COAD
TCGA
PNSSS
DEG_SPOP_SBC_1
0.25
p.K170N
TCGA-AZ-6598
COAD
TCGA
PNSSS
DEG_SPOP_SBC_1
0.25
p.K170N
DO9042
COAD
ICGC
PNSSS
DEG_SPOP_SBC_1
0.25
p.K170N
DO10276
COAD
ICGC
PNSSS
DEG_SPOP_SBC_1
0.25
p.S179G
TCGA-AP-A051
UCEC
TCGA
PNSSS
DEG_SPOP_SBC_1
0.6993
p.S179G
DO42673
UCEC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6993
p.P176S
TCGA-AP-A0LM
UCEC
TCGA
PNSSS
DEG_SPOP_SBC_1
0.3056
p.P176S
DO43306
UCEC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.3056
p.A189V
TCGA-AP-A1DV
UCEC
TCGA
PNSSS
DEG_SPOP_SBC_1
0.1111
p.A189V
DO43186
UCEC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.1111
p.S180Y
DO225357
BRCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.712
p.S180Y
DO222762
COCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.712
p.S180Y
DO51053
PRAD
ICGC
PNSSS
DEG_SPOP_SBC_1
0.712
p.S180Y
SIDM00118
Colorectal Carcinoma
GDSC
PNSSS
DEG_SPOP_SBC_1
0.712
p.S180Y
ACH-001081
Colon/Colorectal Cancer
CCLE
PNSSS
DEG_SPOP_SBC_1
0.712
p.S180Y
HCC2998
large_intestine
COSMIC
PNSSS
DEG_SPOP_SBC_1
0.712
p.S179T
DO229010
COCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO229013
COCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO229003
COCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO229005
COCA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO229480
LAML
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO229505
LAML
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO228947
LICA
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO230993
LUSC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.S179T
DO231007
LUSC
ICGC
PNSSS
DEG_SPOP_SBC_1
0.6005
p.P167L
SIDM00726
Non-Small Cell Lung Carcinoma
GDSC
PNSSS
DEG_SPOP_SBC_1
0.0556
p.P167L
ACH-000875
Lung Cancer
CCLE
PNSSS
DEG_SPOP_SBC_1
0.0556
p.P167L
NCI-H2347
lung
COSMIC
PNSSS
DEG_SPOP_SBC_1
0.0556
p.E186K
EW-13
bone
COSMIC
PNSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with IFI16 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15117
FYN-binding protein 1
DEG_SPOP_SBC_1
26:30
PNSSS
SPOP
0.994
More...
O60741
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
DEG_SPOP_SBC_1
7:11
PNSSS
SPOP
0.7976
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2093:2097
PNSSS
SPOP
0.9431
More...
O94812
BAI1-associated protein 3
DEG_SPOP_SBC_1
423:427
PNSSS
SPOP
0.6757
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1389:1393
PNSSS
SPOP
0.9056
More...
P56177
Homeobox protein DLX-1
DEG_SPOP_SBC_1
218:222
PNSSS
SPOP
0.9889
More...
Q16666
Gamma-interferon-inducible protein 16
DEG_SPOP_SBC_1
177:181
PNSSS
SPOP
0.9508
More...
Q16832
Discoidin domain-containing receptor 2
DEG_SPOP_SBC_1
672:676
PNSSS
SPOP
0.678
More...
Q659A1
Little elongation complex subunit 2
DEG_SPOP_SBC_1
606:610
PNSSS
SPOP
0.9659
More...
Q7L7V1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
DEG_SPOP_SBC_1
9:13
PNSSS
SPOP
0.6156
More...
Q86V97
Kelch repeat and BTB domain-containing protein 6
DEG_SPOP_SBC_1
315:319
PNSSS
SPOP
0.8742
More...
Q8IZQ8
Myocardin
DEG_SPOP_SBC_1
334:338
PNSSS
SPOP
0.9909
More...
Q8N9N5
Protein BANP
DEG_SPOP_SBC_1
338:342
PNSSS
SPOP
0.9929
More...
Q8NHG8
E3 ubiquitin-protein ligase ZNRF2
DEG_SPOP_SBC_1
104:108
PNSSS
SPOP
0.9921
More...
Q8WVZ9
Kelch repeat and BTB domain-containing protein 7
DEG_SPOP_SBC_1
315:319
PNSSS
SPOP
0.9389
More...
Q8WXX7
Autism susceptibility gene 2 protein
DEG_SPOP_SBC_1
1008:1012
PNSSS
SPOP
0.7835
More...
Q96N67
Dedicator of cytokinesis protein 7
DEG_SPOP_SBC_1
860:864
PNSSS
SPOP
0.9622
More...
Q9H1B7
Probable E3 ubiquitin-protein ligase IRF2BPL
DEG_SPOP_SBC_1
216:220
PNSSS
SPOP
0.9952
More...
Q9NQ87
Hairy/enhancer-of-split related with YRPW motif-like protein
DEG_SPOP_SBC_1
298:302
PNSSS
SPOP
0.9384
More...
Q9ULH7
Myocardin-related transcription factor B
DEG_SPOP_SBC_1
1056:1060
PNSSS
SPOP
0.9777
More...
Q15434
RNA-binding motif, single-stranded-interacting protein 2
DEG_SPOP_SBC_1
41:45
PNSSS
SPOP
0.6568
More...
Q9BXY5
Calcyphosin-2
DEG_SPOP_SBC_1
92:96
PNSSS
SPOP
0.9192
More...